Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   JL477_RS06815 Genome accession   NZ_CP068567
Coordinates   1305585..1306553 (+) Length   322 a.a.
NCBI ID   WP_212147433.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CC19PF065     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1300585..1311553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JL477_RS06790 (JL477_06790) cdsA 1301495..1302220 (-) 726 WP_052782285.1 phosphatidate cytidylyltransferase -
  JL477_RS06795 (JL477_06795) - 1302229..1302567 (-) 339 WP_136696331.1 hypothetical protein -
  JL477_RS06800 (JL477_06800) - 1302569..1303876 (-) 1308 WP_212147438.1 NFACT RNA binding domain-containing protein -
  JL477_RS06805 (JL477_06805) mobA 1303938..1304513 (+) 576 WP_175565358.1 molybdenum cofactor guanylyltransferase -
  JL477_RS06810 (JL477_06810) pldA 1304510..1305499 (+) 990 WP_212147435.1 phospholipase A -
  JL477_RS06815 (JL477_06815) ceuB 1305585..1306553 (+) 969 WP_212147433.1 ABC transporter permease Machinery gene
  JL477_RS06820 (JL477_06820) ceuC 1306546..1307484 (+) 939 WP_002881476.1 iron chelate uptake ABC transporter family permease subunit -
  JL477_RS06825 (JL477_06825) ceuD 1307481..1308236 (+) 756 WP_044306198.1 ABC transporter ATP-binding protein -
  JL477_RS06830 (JL477_06830) ceuB 1308249..1309241 (+) 993 WP_044306199.1 enterochelin ABC transporter substrate-binding protein CeuB -
  JL477_RS06840 (JL477_06840) - 1309467..1310021 (-) 555 WP_175565361.1 hypothetical protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35439.37 Da        Isoelectric Point: 9.6678

>NTDB_id=529589 JL477_RS06815 WP_212147433.1 1305585..1306553(+) (ceuB) [Campylobacter jejuni strain CC19PF065]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANIMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=529589 JL477_RS06815 WP_212147433.1 1305585..1306553(+) (ceuB) [Campylobacter jejuni strain CC19PF065]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATATTATGCAAGGAAATTATGAATT
GCTCTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994