Detailed information NTG0529585

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: JL477_RS05820
• Genome accession: NZ_CP068567
• Coordinates: 1105433..1106383 (+)
• Length: 316 a.a.
• NCBI ID: WP_212147316.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain CC19PF065
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1100433..1111383

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JL477_RS09975	-	1100934..1101065 (-)	132	WP_004283885.1	hypothetical protein	-
JL477_RS05790 (JL477_05790)	-	1101251..1101523 (-)	273	WP_002780626.1	hypothetical protein	-
JL477_RS05795 (JL477_05795)	-	1101620..1102492 (-)	873	WP_004283883.1	sulfatase-like hydrolase/transferase	-
JL477_RS09980 (JL477_05800)	-	1102401..1102589 (-)	189	WP_032682936.1	sulfatase-like hydrolase/transferase	-
JL477_RS05805 (JL477_05805)	-	1102599..1102943 (-)	345	WP_002780624.1	hypothetical protein	-
JL477_RS05810 (JL477_05810)	-	1103429..1104544 (-)	1116	WP_212147318.1	polysaccharide pyruvyl transferase family protein	-
JL477_RS05815 (JL477_05815)	waaV	1104556..1105374 (-)	819	WP_002780620.1	glycosyltransferase family 2 protein	-
JL477_RS05820 (JL477_05820)	waaF	1105433..1106383 (+)	951	WP_212147316.1	lipopolysaccharide heptosyltransferase II	Regulator
JL477_RS05825 (JL477_05825)	-	1106435..1107934 (+)	1500	WP_212203111.1	MBOAT family O-acyltransferase	-
JL477_RS05830 (JL477_05830)	-	1107944..1109059 (+)	1116	WP_052781361.1	hypothetical protein	-
JL477_RS05835 (JL477_05835)	gmhA	1109063..1109623 (-)	561	WP_212147314.1	D-sedoheptulose 7-phosphate isomerase	-
JL477_RS05840 (JL477_05840)	rfaE1	1109620..1111005 (-)	1386	WP_212147312.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36350.81 Da
• Isoelectric Point: 10.2506

>NTDB_id=529585 JL477_RS05820 WP_212147316.1 1105433..1106383(+) (waaF) [Campylobacter jejuni strain CC19PF065]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKTIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLNTKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEIVIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAKLVYLDLACMPCMQKTCPLKHHKCMKDLKPERVIEEIKKLSTL

Nucleotide

• Length: 951 bp

>NTDB_id=529585 JL477_RS05820 WP_212147316.1 1105433..1106383(+) (waaF) [Campylobacter jejuni strain CC19PF065]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGACGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAACCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCCAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAATACAAAAGCTCATTTTAAGGACTTAA
AACTTCCATTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTGT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTGTATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGTATGAAAGATTTAAAGCCTGAAAGAGTGATAGAAGAAATTAAAAAATTAAGCACCCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.569	99.051	0.937