Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | JL477_RS05480 | Genome accession | NZ_CP068567 |
| Coordinates | 1037735..1038037 (+) | Length | 100 a.a. |
| NCBI ID | WP_002936694.1 | Uniprot ID | A0A5T1QQE6 |
| Organism | Campylobacter jejuni strain CC19PF065 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1032735..1043037
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JL477_RS05455 (JL477_05455) | rpsR | 1033098..1033358 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| JL477_RS05460 (JL477_05460) | lon | 1033418..1035793 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| JL477_RS05465 (JL477_05465) | bamD | 1035810..1036457 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| JL477_RS05470 (JL477_05470) | fliW | 1036618..1037007 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| JL477_RS05475 (JL477_05475) | proC | 1037007..1037738 (+) | 732 | WP_052801667.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| JL477_RS05480 (JL477_05480) | ctsT | 1037735..1038037 (+) | 303 | WP_002936694.1 | type II secretion system protein | Machinery gene |
| JL477_RS05485 (JL477_05485) | - | 1038034..1038696 (+) | 663 | WP_052817074.1 | hypothetical protein | - |
| JL477_RS05490 (JL477_05490) | - | 1038693..1039145 (+) | 453 | WP_052817076.1 | hypothetical protein | - |
| JL477_RS05495 (JL477_05495) | hemD | 1039142..1039771 (-) | 630 | WP_167842827.1 | uroporphyrinogen-III synthase | - |
| JL477_RS05500 (JL477_05500) | thiE | 1039749..1040381 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| JL477_RS05505 (JL477_05505) | thiD | 1040371..1041183 (-) | 813 | WP_052779729.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| JL477_RS05510 (JL477_05510) | - | 1041180..1041866 (-) | 687 | WP_167842828.1 | endonuclease III domain-containing protein | - |
| JL477_RS05515 (JL477_05515) | - | 1041863..1042624 (-) | 762 | WP_167842829.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12116.19 Da Isoelectric Point: 6.2957
>NTDB_id=529583 JL477_RS05480 WP_002936694.1 1037735..1038037(+) (ctsT) [Campylobacter jejuni strain CC19PF065]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYLQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYLQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=529583 JL477_RS05480 WP_002936694.1 1037735..1038037(+) (ctsT) [Campylobacter jejuni strain CC19PF065]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACCTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACCTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACCTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACCTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |