Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   JMJ69_RS02055 Genome accession   NZ_CP068566
Coordinates   396378..397559 (+) Length   393 a.a.
NCBI ID   WP_212202783.1    Uniprot ID   -
Organism   Campylobacter coli strain CC19DZ037     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 391378..402559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JMJ69_RS02040 (JMJ69_02040) - 391648..393171 (+) 1524 WP_212202780.1 capsular biosynthesis protein -
  JMJ69_RS02045 (JMJ69_02045) - 393168..393911 (+) 744 WP_212202781.1 glycosyltransferase family 2 protein -
  JMJ69_RS02050 (JMJ69_02050) - 394354..396381 (+) 2028 WP_212202782.1 capsular polysaccharide biosynthesis protein -
  JMJ69_RS02055 (JMJ69_02055) kpsS 396378..397559 (+) 1182 WP_212202783.1 capsule biosynthesis protein Regulator
  JMJ69_RS02060 (JMJ69_02060) - 397630..398751 (+) 1122 WP_002787825.1 hypothetical protein -
  JMJ69_RS02065 (JMJ69_02065) - 398748..400118 (+) 1371 WP_002783822.1 cytochrome P450 -
  JMJ69_RS02070 (JMJ69_02070) - 400115..400537 (+) 423 WP_002800011.1 hypothetical protein -
  JMJ69_RS02075 (JMJ69_02075) acpS 400540..400887 (-) 348 WP_002779165.1 holo-ACP synthase -
  JMJ69_RS02080 (JMJ69_02080) fliL 400887..401423 (-) 537 WP_002779164.1 flagellar basal body-associated protein FliL -

Sequence

Protein


Download         Length: 393 a.a.        Molecular weight: 46552.30 Da        Isoelectric Point: 9.9540

>NTDB_id=529554 JMJ69_RS02055 WP_212202783.1 396378..397559(+) (kpsS) [Campylobacter coli strain CC19DZ037]
MKFSDKIKKEFSGKTVLLLQGPVGTFFHRLAIKMKKNKTKVFKLNFNGGDFLFYPSGKRCKCDEKDLENFYENFFKEKKI
DAIVMYNDCRLIHAKAIKVAKELGIGIWIFEEGYLRPYCITFEKDGVNANSSLPRDKNFYLSCNILTKESIKEIPGGFKF
MAFSTFLYWLFSFLLAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKFTEKKLNQKIYSLEKKYFLAILQVYNDTQIKYH
YKKSIEEFIEELILSFANHARAKSYLIFKHHPMDRGYRNYSKLINELSQKYHVEGRIFYVHDTYLPTLLKKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLAYPKKLQFFWREAHAYKPNPSLVINFKNYLLNTNQFNGNFYKNSFLG

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=529554 JMJ69_RS02055 WP_212202783.1 396378..397559(+) (kpsS) [Campylobacter coli strain CC19DZ037]
ATGAAATTTAGCGATAAGATTAAAAAAGAATTTAGCGGTAAAACTGTCTTGCTTTTACAAGGACCTGTAGGCACTTTTTT
TCACCGCCTTGCTATAAAGATGAAAAAAAATAAAACCAAAGTTTTTAAGCTTAATTTTAACGGAGGGGATTTTCTTTTCT
ATCCAAGCGGAAAAAGGTGCAAGTGCGACGAAAAGGATCTTGAAAATTTCTACGAGAACTTTTTTAAAGAAAAAAAGATA
GATGCTATTGTGATGTATAATGATTGTCGTTTGATTCATGCAAAAGCTATCAAAGTAGCTAAGGAGCTTGGCATTGGTAT
TTGGATTTTTGAAGAGGGGTATTTAAGGCCTTATTGTATCACTTTTGAAAAAGATGGGGTCAATGCAAACTCCTCCTTGC
CTCGCGATAAAAATTTCTATCTTTCTTGCAATATCCTTACAAAAGAAAGCATAAAAGAAATTCCAGGTGGTTTTAAATTT
ATGGCCTTTAGTACTTTTCTGTATTGGCTTTTTTCTTTTCTGCTAGCTCCTTTTTTTAACAACAAGCTTCATCATCGCAC
CTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATATAGAAAATACCTTTATAAATTCACAGAAAAAAAACTCA
ATCAAAAAATTTATAGCCTTGAAAAAAAGTATTTTTTGGCTATTTTGCAAGTTTATAATGATACGCAAATTAAGTACCAT
TATAAAAAAAGCATAGAAGAATTTATAGAAGAGCTTATCCTTTCTTTTGCAAATCACGCAAGAGCAAAGTCTTATCTTAT
CTTTAAACATCATCCTATGGATAGGGGATATAGAAATTATTCTAAACTTATAAATGAGCTAAGTCAAAAATACCATGTAG
AAGGAAGAATTTTCTATGTACATGATACTTATTTGCCTACTCTTTTAAAAAAGGCTTTGGGTTGCATCACGATTAATTCT
ACAGTGGGTTTAAGTGCTATTTTAGAGGGTTGTCCTACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCCTAGC
TTATCCTAAAAAACTCCAATTTTTTTGGCGCGAAGCTCATGCTTATAAACCCAATCCTAGCTTGGTTATAAATTTTAAAA
ATTATCTTTTAAATACAAATCAGTTCAATGGCAATTTTTACAAAAATTCGTTTTTAGGTTGA

Domains

Predicted by InterproScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(81-387)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

88.01

99.746

0.878