Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   JKJ03_RS06930 Genome accession   NZ_CP068563
Coordinates   1328006..1328470 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain GUMT319     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1323006..1333470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JKJ03_RS06910 (JKJ03_06910) - 1323487..1325307 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  JKJ03_RS06915 (JKJ03_06915) - 1325288..1326501 (-) 1214 Protein_1312 aminotransferase A -
  JKJ03_RS06920 (JKJ03_06920) - 1326702..1326863 (-) 162 WP_007409608.1 hypothetical protein -
  JKJ03_RS06925 (JKJ03_06925) cheV 1327052..1327963 (+) 912 WP_071391910.1 chemotaxis protein CheV -
  JKJ03_RS06930 (JKJ03_06930) kre 1328006..1328470 (-) 465 WP_003154622.1 YkyB family protein Regulator
  JKJ03_RS06935 (JKJ03_06935) - 1328593..1329885 (-) 1293 WP_071391909.1 MFS transporter -
  JKJ03_RS06940 (JKJ03_06940) - 1329961..1330455 (-) 495 WP_102421873.1 L,D-transpeptidase family protein -
  JKJ03_RS06945 (JKJ03_06945) - 1330530..1331393 (-) 864 WP_071391907.1 metallophosphoesterase -
  JKJ03_RS06950 (JKJ03_06950) fadH 1331537..1332301 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  JKJ03_RS06955 (JKJ03_06955) - 1332412..1332960 (+) 549 WP_071391906.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=529456 JKJ03_RS06930 WP_003154622.1 1328006..1328470(-) (kre) [Bacillus velezensis strain GUMT319]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=529456 JKJ03_RS06930 WP_003154622.1 1328006..1328470(-) (kre) [Bacillus velezensis strain GUMT319]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929