Detailed information NTG0529078

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K8B91_RS23440
• Genome accession: NZ_CP082777
• Coordinates: 4874881..4875864 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli O25:H1 strain CU39ES-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4869881..4880864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8B91_RS23420 (K8B91_23300)	-	4871513..4871620 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
K8B91_RS23425 (K8B91_23305)	-	4871996..4872103 (-)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
K8B91_RS23430 (K8B91_23310)	yhjV	4872579..4873850 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
K8B91_RS23435 (K8B91_23315)	dppF	4873880..4874884 (-)	1005	WP_000103580.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K8B91_RS23440 (K8B91_23320)	amiE	4874881..4875864 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
K8B91_RS23445 (K8B91_23325)	dppC	4875875..4876777 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K8B91_RS23450 (K8B91_23330)	dppB	4876787..4877806 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K8B91_RS23455 (K8B91_23335)	-	4877824..4878051 (+)	228	WP_000198577.1	hypothetical protein	-
K8B91_RS23460 (K8B91_23340)	dppA	4878113..4879720 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=529078 K8B91_RS23440 WP_001196477.1 4874881..4875864(-) (amiE) [Escherichia coli O25:H1 strain CU39ES-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=529078 K8B91_RS23440 WP_001196477.1 4874881..4875864(-) (amiE) [Escherichia coli O25:H1 strain CU39ES-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404