Detailed information NTG0529005

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K8B91_RS01055
• Genome accession: NZ_CP082777
• Coordinates: 216373..217398 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O25:H1 strain CU39ES-1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 211373..222398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8B91_RS01025 (K8B91_01020)	zapB	211457..211702 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K8B91_RS01030 (K8B91_01025)	rraA	211787..212272 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K8B91_RS01035 (K8B91_01030)	menA	212374..213291 (-)	918	WP_094284357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K8B91_RS01040 (K8B91_01035)	hslU	213358..214689 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K8B91_RS01045 (K8B91_01040)	hslV	214699..215229 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K8B91_RS01050 (K8B91_01045)	ftsN	215322..216281 (-)	960	WP_000068846.1	cell division protein FtsN	-
K8B91_RS01055 (K8B91_01050)	cytR	216373..217398 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
K8B91_RS01060 (K8B91_01055)	priA	217554..219752 (-)	2199	WP_001305041.1	primosomal protein N'	Machinery gene
K8B91_RS01065 (K8B91_01060)	rpmE	219955..220167 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K8B91_RS01070 (K8B91_01065)	yiiX	220228..220836 (-)	609	WP_000702296.1	YiiX family permuted papain-like enzyme	-
K8B91_RS01075 (K8B91_01070)	metJ	220896..221213 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=529005 K8B91_RS01055 WP_000644904.1 216373..217398(-) (cytR) [Escherichia coli O25:H1 strain CU39ES-1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=529005 K8B91_RS01055 WP_000644904.1 216373..217398(-) (cytR) [Escherichia coli O25:H1 strain CU39ES-1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628