Detailed information NTG0528990

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: K8B92_RS22335
• Genome accession: NZ_CP082776
• Coordinates: 4620930..4621913 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli O4:H5 strain CU532-9
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4615930..4626913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8B92_RS22310 (K8B92_22205)	bcsF	4616091..4616282 (+)	192	WP_000988311.1	cellulose biosynthesis protein BcsF	-
K8B92_RS22315 (K8B92_22210)	bcsG	4616279..4617958 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
K8B92_RS22320 (K8B92_22215)	ldrD	4618045..4618152 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
K8B92_RS22325 (K8B92_22220)	yhjV	4618628..4619899 (+)	1272	WP_001467807.1	amino acid permease	-
K8B92_RS22330 (K8B92_22225)	dppF	4619929..4620933 (-)	1005	WP_000103583.1	dipeptide ABC transporter ATP-binding subunit DppF	-
K8B92_RS22335 (K8B92_22230)	amiE	4620930..4621913 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
K8B92_RS22340 (K8B92_22235)	dppC	4621924..4622826 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
K8B92_RS22345 (K8B92_22240)	dppB	4622836..4623855 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
K8B92_RS22350 (K8B92_22245)	dppA	4624006..4625613 (-)	1608	WP_074448970.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=528990 K8B92_RS22335 WP_001196477.1 4620930..4621913(-) (amiE) [Escherichia coli O4:H5 strain CU532-9]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=528990 K8B92_RS22335 WP_001196477.1 4620930..4621913(-) (amiE) [Escherichia coli O4:H5 strain CU532-9]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTCAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404