Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | JKL50_RS11855 | Genome accession | NZ_CP068389 |
| Coordinates | 2288407..2290842 (-) | Length | 811 a.a. |
| NCBI ID | WP_007496263.1 | Uniprot ID | A0A5K1N9Z5 |
| Organism | Bacillus altitudinis strain ws31 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2283407..2295842
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JKL50_RS11830 (JKL50_11830) | ispF | 2283415..2283891 (-) | 477 | WP_007496273.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| JKL50_RS11835 (JKL50_11835) | ispD | 2283895..2284584 (-) | 690 | WP_008345432.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| JKL50_RS11840 (JKL50_11840) | - | 2284598..2285698 (-) | 1101 | WP_003217214.1 | PIN/TRAM domain-containing protein | - |
| JKL50_RS11845 (JKL50_11845) | disA | 2285852..2286931 (-) | 1080 | WP_007496267.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| JKL50_RS11850 (JKL50_11850) | radA | 2286934..2288313 (-) | 1380 | WP_017359160.1 | DNA repair protein RadA | Machinery gene |
| JKL50_RS11855 (JKL50_11855) | clpC | 2288407..2290842 (-) | 2436 | WP_007496263.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| JKL50_RS11860 (JKL50_11860) | - | 2290839..2291930 (-) | 1092 | WP_024718295.1 | protein arginine kinase | - |
| JKL50_RS11865 (JKL50_11865) | - | 2291935..2292492 (-) | 558 | WP_007496258.1 | UvrB/UvrC motif-containing protein | - |
| JKL50_RS11870 (JKL50_11870) | - | 2292507..2292971 (-) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90025.76 Da Isoelectric Point: 6.2469
>NTDB_id=528841 JKL50_RS11855 WP_007496263.1 2288407..2290842(-) (clpC) [Bacillus altitudinis strain ws31]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=528841 JKL50_RS11855 WP_007496263.1 2288407..2290842(-) (clpC) [Bacillus altitudinis strain ws31]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATCGGAACAGAGCATATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TACACACCTAGAGCGAAGAAGGTTACGGAGCTTTCTATGGATGAAGCGAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGTGAGGGAGAGGGGGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTAAGCTTAAATA
AAGCACGCCAGCAAGTATTGCAGCTTCTAGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCCAAT
ACACCAACTTTAGATAGCTTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTGATTGGCCGTAG
CAAAGAAATTCAGCGTGTCATTGAGGTCCTAAGTAGAAGAACAAAGAATAACCCTGTCTTGATTGGAGAGCCTGGTGTTG
GTAAAACAGCGATCGCAGAAGGCCTCGCACAGCAAATTATTCACAACGAAGTGCCTGAAATTTTGCGTGATAAACGAGTC
ATGACACTTGATATGGGAACCGTTGTAGCGGGAACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATCCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATTGGTGCAGGAGGAGCAGAGGGTG
CGATTGATGCCTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATCGGGGCAACAACGTTAGATGAG
TACCGTAAATATATTGAAAAAGATGCTGCACTTGAACGTCGATTCCAGCCAATTCAAGTGGACCAGCCATCTGTTGATGA
AAGTATTCAAATTTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCCATTGAGG
CGGCCGTAAAACTTTCTGATCGTTATATCTCCGATCGTTTCCTTCCAGATAAGGCGATCGACTTAATTGATGAGGCGGGT
TCAAAAGTTCGCTTACGTTCTTTCACAACACCGCCTAATCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCCGCTTCTCTTCGTGATACGGAGCAACGTTTGCGTGAAAAGG
TAGAAGTGACGAAGAAATCTTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTTTCTGTTGATGATATCGCAATGGTT
GTTTCTAGCTGGACGGGAGTACCTGTTTCAAAAATTGCTCAAACAGAAACAGATAAGCTCCTGAACATGGAACAATTGCT
CCACTCTCGCGTCATTGGACAGGATGAAGCAGTTGTTGCTGTTGCAAAAGCTGTAAGACGTGCCCGTGCTGGACTAAAAG
ATCCGAAACGTCCGATTGGCTCCTTTATTTTCTTAGGGCCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCC
GAGTCTATCTTCGGTGATGAAGAAGCGATGATTCGTATTGATATGTCTGAGTACATGGAAAAACACTCGACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTGGGTTATGATGAGGGCGGTCAGCTGACTGAAAAGGTGAGAAGAAAGCCGTATTCTG
TCGTGCTTCTAGATGAGATTGAAAAGGCGCACCCTGATGTGTTTAACATCTTACTTCAAGTGTTAGAAGATGGTCGTCTC
ACTGATTCTAAAGGTCGTACTGTTGACTTTAGAAATACGATTTTGATTATGACTTCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAAGATATGAAAGGCAAAGTAATGGGTGAGC
TGAAACGTGCGTTTAGACCGGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTCGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTGACAAAACGACTAAAAGAGCAGGACCTTTCAATTGAATTGACGGAAGC
AGCAAAAGCCAAGATTGCCGACGAAGGCGTAGATCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TCGAGGATCGACTTTCTGAGGAATTGCTGAAAGGCAATATTGAAAAGGGCCAACATATCGTATTAGATGTAGAAGATGGA
GAAATTGTCGTAAAAGCAACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATCGGAACAGAGCATATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TACACACCTAGAGCGAAGAAGGTTACGGAGCTTTCTATGGATGAAGCGAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGTGAGGGAGAGGGGGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTAAGCTTAAATA
AAGCACGCCAGCAAGTATTGCAGCTTCTAGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCCAAT
ACACCAACTTTAGATAGCTTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTGATTGGCCGTAG
CAAAGAAATTCAGCGTGTCATTGAGGTCCTAAGTAGAAGAACAAAGAATAACCCTGTCTTGATTGGAGAGCCTGGTGTTG
GTAAAACAGCGATCGCAGAAGGCCTCGCACAGCAAATTATTCACAACGAAGTGCCTGAAATTTTGCGTGATAAACGAGTC
ATGACACTTGATATGGGAACCGTTGTAGCGGGAACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATCCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATTGGTGCAGGAGGAGCAGAGGGTG
CGATTGATGCCTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATCGGGGCAACAACGTTAGATGAG
TACCGTAAATATATTGAAAAAGATGCTGCACTTGAACGTCGATTCCAGCCAATTCAAGTGGACCAGCCATCTGTTGATGA
AAGTATTCAAATTTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCCATTGAGG
CGGCCGTAAAACTTTCTGATCGTTATATCTCCGATCGTTTCCTTCCAGATAAGGCGATCGACTTAATTGATGAGGCGGGT
TCAAAAGTTCGCTTACGTTCTTTCACAACACCGCCTAATCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCCGCTTCTCTTCGTGATACGGAGCAACGTTTGCGTGAAAAGG
TAGAAGTGACGAAGAAATCTTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTTTCTGTTGATGATATCGCAATGGTT
GTTTCTAGCTGGACGGGAGTACCTGTTTCAAAAATTGCTCAAACAGAAACAGATAAGCTCCTGAACATGGAACAATTGCT
CCACTCTCGCGTCATTGGACAGGATGAAGCAGTTGTTGCTGTTGCAAAAGCTGTAAGACGTGCCCGTGCTGGACTAAAAG
ATCCGAAACGTCCGATTGGCTCCTTTATTTTCTTAGGGCCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCC
GAGTCTATCTTCGGTGATGAAGAAGCGATGATTCGTATTGATATGTCTGAGTACATGGAAAAACACTCGACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTGGGTTATGATGAGGGCGGTCAGCTGACTGAAAAGGTGAGAAGAAAGCCGTATTCTG
TCGTGCTTCTAGATGAGATTGAAAAGGCGCACCCTGATGTGTTTAACATCTTACTTCAAGTGTTAGAAGATGGTCGTCTC
ACTGATTCTAAAGGTCGTACTGTTGACTTTAGAAATACGATTTTGATTATGACTTCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAAGATATGAAAGGCAAAGTAATGGGTGAGC
TGAAACGTGCGTTTAGACCGGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTCGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTGACAAAACGACTAAAAGAGCAGGACCTTTCAATTGAATTGACGGAAGC
AGCAAAAGCCAAGATTGCCGACGAAGGCGTAGATCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TCGAGGATCGACTTTCTGAGGAATTGCTGAAAGGCAATATTGAAAAGGGCCAACATATCGTATTAGATGTAGAAGATGGA
GAAATTGTCGTAAAAGCAACGGCTGCTACGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.054 |
100 |
0.961 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.489 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.126 |
100 |
0.47 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.088 |
87.916 |
0.432 |
| clpE | Streptococcus mutans UA159 |
53.323 |
79.778 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.713 |
79.531 |
0.419 |