Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   JKL50_RS10505 Genome accession   NZ_CP068389
Coordinates   2038472..2038900 (+) Length   142 a.a.
NCBI ID   WP_007498233.1    Uniprot ID   A0AAU7FLT6
Organism   Bacillus altitudinis strain ws31     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2033472..2043900
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JKL50_RS10495 (JKL50_10495) - 2034059..2036044 (-) 1986 WP_035390499.1 hydantoinase B/oxoprolinase family protein -
  JKL50_RS10500 (JKL50_10500) - 2036034..2038103 (-) 2070 WP_050826929.1 hydantoinase/oxoprolinase family protein -
  JKL50_RS10505 (JKL50_10505) nucA/comI 2038472..2038900 (+) 429 WP_007498233.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  JKL50_RS10510 (JKL50_10510) - 2039027..2040724 (+) 1698 WP_035390503.1 methyl-accepting chemotaxis protein -
  JKL50_RS10515 (JKL50_10515) - 2040861..2041247 (+) 387 WP_041091056.1 competence protein ComJ -
  JKL50_RS10520 (JKL50_10520) - 2041249..2042055 (-) 807 WP_202734000.1 aminoglycoside N(3)-acetyltransferase -
  JKL50_RS10525 (JKL50_10525) - 2042080..2042499 (-) 420 WP_026050043.1 Lrp/AsnC family transcriptional regulator -
  JKL50_RS10530 (JKL50_10530) - 2042616..2043380 (+) 765 WP_017366587.1 MBL fold metallo-hydrolase -
  JKL50_RS10535 (JKL50_10535) - 2043427..2043756 (-) 330 WP_017366586.1 YckD family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15926.90 Da        Isoelectric Point: 6.4881

>NTDB_id=528839 JKL50_RS10505 WP_007498233.1 2038472..2038900(+) (nucA/comI) [Bacillus altitudinis strain ws31]
MKLLKTILLLLLIVIGIATGYVQLGQHKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKNSDEQRDKS
LHGIPTKRGYDRDEWPMAMCKEGGAGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIIE

Nucleotide


Download         Length: 429 bp        

>NTDB_id=528839 JKL50_RS10505 WP_007498233.1 2038472..2038900(+) (nucA/comI) [Bacillus altitudinis strain ws31]
ATGAAACTTCTTAAAACCATTCTCTTGCTTTTATTGATTGTCATTGGTATAGCGACAGGCTATGTCCAACTAGGGCAACA
TAAACAAGAGACGACAAACTCTTCTTATGACAAAACCATTCACTTTCCATCAGATCGATATCCAGAAACCGCGAAGCACA
TAGAAGAAGCTATTGACGAAGGTCATTCTTCCATTTGCACCATTGATCGAAAAAATAGTGATGAGCAAAGAGACAAATCA
CTTCATGGCATTCCAACAAAGCGTGGTTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGTGGAGCAGGGGC
TTCTGTCAAATATGTACGTCCTTCGGATAATAGGGGGGCAGGCTCTTGGGTAAGTCATCAATTATCAGATGATCCTGATG
GCACAAGAATCCAATTTATTATCGAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

68.224

75.352

0.514