Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JKL50_RS08390 Genome accession   NZ_CP068389
Coordinates   1583052..1583843 (-) Length   263 a.a.
NCBI ID   WP_017358838.1    Uniprot ID   A0A5K1NDE0
Organism   Bacillus altitudinis strain ws31     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1578052..1588843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JKL50_RS08365 (JKL50_08365) - 1580485..1581468 (-) 984 WP_017366872.1 glycosyltransferase family 2 protein -
  JKL50_RS08370 (JKL50_08370) - 1581770..1582042 (-) 273 WP_017366871.1 YfhJ family protein -
  JKL50_RS08375 (JKL50_08375) - 1582159..1582308 (+) 150 WP_003217849.1 small, acid-soluble spore protein K -
  JKL50_RS08380 (JKL50_08380) - 1582334..1582507 (+) 174 WP_003217811.1 YpzG family protein -
  JKL50_RS08385 (JKL50_08385) - 1582734..1583048 (-) 315 WP_008341991.1 YfhH family protein -
  JKL50_RS08390 (JKL50_08390) recX 1583052..1583843 (-) 792 WP_017358838.1 recombination regulator RecX Regulator
  JKL50_RS08395 (JKL50_08395) - 1583939..1584838 (+) 900 WP_202734630.1 TIGR01777 family oxidoreductase -
  JKL50_RS08400 (JKL50_08400) - 1584891..1585001 (+) 111 WP_017358836.1 YfhE family protein -
  JKL50_RS08405 (JKL50_08405) - 1585063..1585218 (+) 156 WP_048002109.1 YfhD family protein -
  JKL50_RS08410 (JKL50_08410) - 1585253..1585840 (-) 588 WP_234891336.1 nitroreductase family protein -
  JKL50_RS08415 (JKL50_08415) - 1586111..1587367 (+) 1257 WP_008341668.1 transcriptional regulator -
  JKL50_RS08420 (JKL50_08420) - 1587403..1587870 (-) 468 WP_007496690.1 thiol-disulfide oxidoreductase DCC family protein -
  JKL50_RS08425 (JKL50_08425) - 1588209..1588757 (-) 549 WP_008341670.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30630.03 Da        Isoelectric Point: 7.0789

>NTDB_id=528837 JKL50_RS08390 WP_017358838.1 1583052..1583843(-) (recX) [Bacillus altitudinis strain ws31]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=528837 JKL50_RS08390 WP_017358838.1 1583052..1583843(-) (recX) [Bacillus altitudinis strain ws31]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAATACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGATGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCATATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AATTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTGAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NDE0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635