Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   JKL50_RS06980 Genome accession   NZ_CP068389
Coordinates   1313889..1314086 (-) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain ws31     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1308889..1319086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JKL50_RS06955 (JKL50_06955) - 1309059..1310039 (-) 981 WP_182489085.1 ABC transporter ATP-binding protein -
  JKL50_RS06960 (JKL50_06960) - 1310210..1311004 (-) 795 WP_017360172.1 DUF2268 domain-containing protein -
  JKL50_RS06965 (JKL50_06965) fabF 1311082..1312323 (-) 1242 WP_007499040.1 beta-ketoacyl-ACP synthase II -
  JKL50_RS06970 (JKL50_06970) - 1312345..1313283 (-) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  JKL50_RS06975 (JKL50_06975) - 1313453..1313686 (+) 234 WP_060832239.1 hypothetical protein -
  JKL50_RS06980 (JKL50_06980) comZ 1313889..1314086 (-) 198 WP_008348507.1 ComZ family protein Regulator
  JKL50_RS06985 (JKL50_06985) med 1314098..1315063 (-) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  JKL50_RS06990 (JKL50_06990) - 1315154..1315729 (-) 576 WP_202734565.1 nad binding enzyme -
  JKL50_RS06995 (JKL50_06995) - 1315805..1316545 (-) 741 WP_007499048.1 hypothetical protein -
  JKL50_RS07000 (JKL50_07000) - 1316758..1316952 (+) 195 WP_008348514.1 YjzD family protein -
  JKL50_RS07005 (JKL50_07005) - 1317072..1318337 (-) 1266 WP_007499050.1 MFS transporter -
  JKL50_RS07010 (JKL50_07010) - 1318507..1318686 (-) 180 WP_008348517.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=528828 JKL50_RS06980 WP_008348507.1 1313889..1314086(-) (comZ) [Bacillus altitudinis strain ws31]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=528828 JKL50_RS06980 WP_008348507.1 1313889..1314086(-) (comZ) [Bacillus altitudinis strain ws31]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662