Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   JKL50_RS05755 Genome accession   NZ_CP068389
Coordinates   1084759..1085220 (+) Length   153 a.a.
NCBI ID   WP_007498684.1    Uniprot ID   A0A9X0FXQ0
Organism   Bacillus altitudinis strain ws31     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1079759..1090220
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JKL50_RS05725 (JKL50_05725) - 1079794..1080291 (+) 498 WP_008348009.1 L,D-transpeptidase family protein -
  JKL50_RS05730 (JKL50_05730) - 1080365..1081642 (+) 1278 WP_017367146.1 MFS transporter -
  JKL50_RS05735 (JKL50_05735) - 1081870..1082046 (-) 177 WP_189337190.1 hypothetical protein -
  JKL50_RS05740 (JKL50_05740) - 1082212..1082427 (+) 216 WP_008348016.1 hypothetical protein -
  JKL50_RS05745 (JKL50_05745) - 1082597..1083529 (-) 933 WP_046343420.1 DMT family transporter -
  JKL50_RS05750 (JKL50_05750) - 1083643..1084539 (+) 897 WP_202734526.1 AraC family transcriptional regulator -
  JKL50_RS05755 (JKL50_05755) kre 1084759..1085220 (+) 462 WP_007498684.1 YkyB family protein Regulator
  JKL50_RS05760 (JKL50_05760) - 1085458..1086366 (-) 909 WP_008348035.1 chemotaxis protein -
  JKL50_RS05765 (JKL50_05765) - 1086440..1087750 (-) 1311 WP_007498688.1 MFS transporter -
  JKL50_RS05770 (JKL50_05770) - 1087876..1088415 (-) 540 WP_202734527.1 RDD family protein -
  JKL50_RS05775 (JKL50_05775) - 1088716..1088868 (+) 153 WP_017367142.1 hypothetical protein -
  JKL50_RS05780 (JKL50_05780) - 1088933..1089817 (-) 885 WP_017359428.1 cation diffusion facilitator family transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17739.31 Da        Isoelectric Point: 10.2617

>NTDB_id=528820 JKL50_RS05755 WP_007498684.1 1084759..1085220(+) (kre) [Bacillus altitudinis strain ws31]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPRYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=528820 JKL50_RS05755 WP_007498684.1 1084759..1085220(+) (kre) [Bacillus altitudinis strain ws31]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAGATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCATCTGCCACCAACCAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCAAAAGCGAATATGTCATTAAATCGAGCGAAACAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTATACAAAACCCGTCTTCAAACGGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771