Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   JKL50_RS05625 Genome accession   NZ_CP068389
Coordinates   1064128..1064709 (-) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain ws31     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1059128..1069709
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JKL50_RS05595 (JKL50_05595) - 1059160..1059651 (-) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -
  JKL50_RS05600 (JKL50_05600) mobB 1059644..1060171 (-) 528 WP_202734523.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  JKL50_RS05605 (JKL50_05605) glp 1060153..1061427 (-) 1275 WP_202734524.1 gephyrin-like molybdotransferase Glp -
  JKL50_RS05610 (JKL50_05610) - 1061437..1062453 (-) 1017 WP_035392194.1 MoeB/ThiF family adenylyltransferase -
  JKL50_RS05615 (JKL50_05615) - 1062483..1063064 (-) 582 WP_035392197.1 molybdenum cofactor guanylyltransferase -
  JKL50_RS05620 (JKL50_05620) - 1063148..1064065 (+) 918 WP_116306799.1 sigmaE regulated sporulation protein -
  JKL50_RS05625 (JKL50_05625) rok 1064128..1064709 (-) 582 WP_007498648.1 hypothetical protein Regulator
  JKL50_RS05630 (JKL50_05630) - 1065191..1065649 (-) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  JKL50_RS05635 (JKL50_05635) ahpA 1065925..1066467 (-) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  JKL50_RS05640 (JKL50_05640) - 1066739..1067548 (+) 810 WP_017359416.1 mechanosensitive ion channel family protein -
  JKL50_RS05645 (JKL50_05645) - 1067573..1067815 (-) 243 WP_003211408.1 YkuS family protein -
  JKL50_RS05650 (JKL50_05650) - 1067866..1069044 (-) 1179 WP_051005660.1 N-acetyldiaminopimelate deacetylase -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=528819 JKL50_RS05625 WP_007498648.1 1064128..1064709(-) (rok) [Bacillus altitudinis strain ws31]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=528819 JKL50_RS05625 WP_007498648.1 1064128..1064709(-) (rok) [Bacillus altitudinis strain ws31]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782