Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   JJL14_RS14410 Genome accession   NZ_CP068287
Coordinates   2973342..2973968 (-) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain 1575     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2968342..2978968
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJL14_RS14395 (JJL14_14400) helD 2968581..2970635 (-) 2055 WP_063147649.1 DNA helicase IV -
  JJL14_RS14400 (JJL14_14405) - 2970758..2971204 (+) 447 WP_022647660.1 YccF domain-containing protein -
  JJL14_RS14405 (JJL14_14410) yccS 2971223..2973385 (+) 2163 WP_202075592.1 YccS family putative transporter -
  JJL14_RS14410 (JJL14_14415) sxy/tfoX 2973342..2973968 (-) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  JJL14_RS14415 (JJL14_14420) sulA 2974186..2974695 (+) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  JJL14_RS14420 (JJL14_14425) ompA 2975052..2976104 (+) 1053 WP_017694761.1 porin OmpA -
  JJL14_RS14425 (JJL14_14430) matP 2976170..2976622 (-) 453 WP_063147651.1 macrodomain Ter protein MatP -
  JJL14_RS14430 (JJL14_14435) - 2976809..2978569 (+) 1761 WP_023305819.1 AAA family ATPase -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=528753 JJL14_RS14410 WP_023315767.1 2973342..2973968(-) (sxy/tfoX) [Enterobacter hormaechei strain 1575]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=528753 JJL14_RS14410 WP_023315767.1 2973342..2973968(-) (sxy/tfoX) [Enterobacter hormaechei strain 1575]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGTGAAATTCATCATCGCGCACT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTATTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572