Detailed information NTG0528748

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K8B88_RS01055
• Genome accession: NZ_CP082774
• Coordinates: 216824..217849 (-)
• Length: 341 a.a.
• NCBI ID: WP_021523626.1
• Uniprot ID: -
• Organism: Escherichia coli O16:H6 strain CU37RT-2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 211824..222849

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8B88_RS01025 (K8B88_01015)	zapB	211908..212153 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K8B88_RS01030 (K8B88_01020)	rraA	212238..212723 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K8B88_RS01035 (K8B88_01025)	menA	212816..213742 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K8B88_RS01040 (K8B88_01030)	hslU	213809..215140 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K8B88_RS01045 (K8B88_01035)	hslV	215150..215680 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K8B88_RS01050 (K8B88_01040)	ftsN	215773..216732 (-)	960	WP_000068834.1	cell division protein FtsN	-
K8B88_RS01055 (K8B88_01045)	cytR	216824..217849 (-)	1026	WP_021523626.1	DNA-binding transcriptional regulator CytR	Regulator
K8B88_RS01060 (K8B88_01050)	priA	218005..220203 (-)	2199	WP_021523627.1	primosomal protein N'	Machinery gene
K8B88_RS01065 (K8B88_01055)	rpmE	220406..220618 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K8B88_RS01070 (K8B88_01060)	yiiX	220679..221287 (-)	609	WP_021523628.1	YiiX family permuted papain-like enzyme	-
K8B88_RS01075 (K8B88_01065)	metJ	221347..221664 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37835.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=528748 K8B88_RS01055 WP_021523626.1 216824..217849(-) (cytR) [Escherichia coli O16:H6 strain CU37RT-2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQSTRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=528748 K8B88_RS01055 WP_021523626.1 216824..217849(-) (cytR) [Escherichia coli O16:H6 strain CU37RT-2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGTCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCTCAGCCTATGGGTCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GAATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.478	98.24	0.633
cytR	Vibrio cholerae C6706	65.749	95.894	0.63