Detailed information NTG0528658

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K8B87_RS01055
• Genome accession: NZ_CP082773
• Coordinates: 215045..216070 (-)
• Length: 341 a.a.
• NCBI ID: WP_087602926.1
• Uniprot ID: -
• Organism: Escherichia coli O99:H6 strain CU42ET-1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 210045..221070

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8B87_RS01025 (K8B87_01025)	zapB	210129..210374 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
K8B87_RS01030 (K8B87_01030)	rraA	210459..210944 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
K8B87_RS01035 (K8B87_01035)	menA	211037..211963 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K8B87_RS01040 (K8B87_01040)	hslU	212030..213361 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K8B87_RS01045 (K8B87_01045)	hslV	213371..213901 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K8B87_RS01050 (K8B87_01050)	ftsN	213994..214953 (-)	960	WP_000068834.1	cell division protein FtsN	-
K8B87_RS01055 (K8B87_01055)	cytR	215045..216070 (-)	1026	WP_087602926.1	DNA-binding transcriptional regulator CytR	Regulator
K8B87_RS01060 (K8B87_01060)	priA	216226..218424 (-)	2199	WP_087602927.1	primosomal protein N'	Machinery gene
K8B87_RS01065 (K8B87_01065)	rpmE	218627..218839 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
K8B87_RS01070 (K8B87_01070)	yiiX	218900..219508 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
K8B87_RS01075 (K8B87_01075)	metJ	219568..219885 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37877.78 Da
• Isoelectric Point: 5.9204

>NTDB_id=528658 K8B87_RS01055 WP_087602926.1 215045..216070(-) (cytR) [Escherichia coli O99:H6 strain CU42ET-1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRESTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=528658 K8B87_RS01055 WP_087602926.1 215045..216070(-) (cytR) [Escherichia coli O99:H6 strain CU42ET-1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCACTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAGCACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGAATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	65.443	95.894	0.628
cytR	Vibrio parahaemolyticus RIMD 2210633	63.582	98.24	0.625