Detailed information NTG0528470

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K7X31_RS21205
• Genome accession: NZ_CP082357
• Coordinates: 4488136..4489161 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain VCSW7
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4483136..4494161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7X31_RS21185 (K7X31_21180)	metJ	4484321..4484638 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
K7X31_RS21190 (K7X31_21185)	yiiX	4484698..4485306 (+)	609	WP_001550378.1	YiiX family permuted papain-like enzyme	-
K7X31_RS21195 (K7X31_21190)	rpmE	4485367..4485579 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
K7X31_RS21200 (K7X31_21195)	priA	4485782..4487980 (+)	2199	WP_223024790.1	primosomal protein N'	Machinery gene
K7X31_RS21205 (K7X31_21200)	cytR	4488136..4489161 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
K7X31_RS21210 (K7X31_21205)	ftsN	4489253..4490212 (+)	960	WP_000068844.1	cell division protein FtsN	-
K7X31_RS21215 (K7X31_21210)	hslV	4490305..4490835 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
K7X31_RS21220 (K7X31_21215)	hslU	4490845..4492176 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
K7X31_RS21225 (K7X31_21220)	menA	4492243..4493169 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
K7X31_RS21230 (K7X31_21225)	rraA	4493262..4493747 (+)	486	WP_001545067.1	ribonuclease E activity regulator RraA	-
K7X31_RS21235 (K7X31_21230)	zapB	4493832..4494077 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=528470 K7X31_RS21205 WP_000644908.1 4488136..4489161(+) (cytR) [Escherichia coli strain VCSW7]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=528470 K7X31_RS21205 WP_000644908.1 4488136..4489161(+) (cytR) [Escherichia coli strain VCSW7]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTAATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCAAGCATCGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTAGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625