Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   I6J08_RS10105 Genome accession   NZ_CP068219
Coordinates   2053178..2053843 (+) Length   221 a.a.
NCBI ID   WP_017637235.1    Uniprot ID   A0A654C6R6
Organism   Staphylococcus pasteuri strain FDAARGOS_1151     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2048178..2058843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J08_RS10075 (I6J08_10070) - 2048286..2048498 (+) 213 WP_017637240.1 hypothetical protein -
  I6J08_RS10080 (I6J08_10075) - 2048585..2050225 (-) 1641 WP_017637239.1 alpha-keto acid decarboxylase family protein -
  I6J08_RS10085 (I6J08_10080) - 2050392..2050841 (+) 450 WP_017637238.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6J08_RS10090 (I6J08_10085) - 2051075..2051176 (+) 102 WP_017637237.1 SE2200 family small protein -
  I6J08_RS10095 (I6J08_10090) - 2051268..2052722 (-) 1455 WP_159333745.1 alkaline phosphatase -
  I6J08_RS10100 (I6J08_10095) - 2052989..2053156 (+) 168 WP_017637236.1 hypothetical protein -
  I6J08_RS10105 (I6J08_10100) braR 2053178..2053843 (+) 666 WP_017637235.1 response regulator transcription factor Regulator
  I6J08_RS10110 (I6J08_10105) braS 2053849..2054742 (+) 894 WP_159333744.1 sensor histidine kinase Regulator
  I6J08_RS10115 (I6J08_10110) - 2054849..2055601 (+) 753 WP_017637232.1 ABC transporter ATP-binding protein -
  I6J08_RS10120 (I6J08_10115) - 2055607..2057613 (+) 2007 WP_108168243.1 FtsX-like permease family protein -
  I6J08_RS10125 (I6J08_10120) - 2057736..2058530 (+) 795 WP_029055924.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25659.70 Da        Isoelectric Point: 4.6631

>NTDB_id=528193 I6J08_RS10105 WP_017637235.1 2053178..2053843(+) (braR) [Staphylococcus pasteuri strain FDAARGOS_1151]
MKIFILEDDFVIAESLANELKNWNYEVSIAKQFSNILDDFITYQPDIVLLDINLPTLNGFHWCQEIRKISNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKVQALLRRTYDLAVSNDELTVKGCKLIIDEAKIIYNEEAIQLSLTELQIIK
LLFQNEGKFVKRNALIEKCWESENYIDDNTLAVNMTRLRKKLNQIDLKDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=528193 I6J08_RS10105 WP_017637235.1 2053178..2053843(+) (braR) [Staphylococcus pasteuri strain FDAARGOS_1151]
ATGAAGATTTTTATACTAGAAGATGATTTTGTCATTGCAGAAAGTTTAGCTAATGAACTTAAAAATTGGAATTATGAGGT
AAGTATAGCTAAACAATTCTCAAATATTTTAGATGACTTCATCACATATCAACCTGACATAGTATTGTTAGATATTAATC
TACCGACATTAAATGGATTTCATTGGTGCCAAGAAATAAGAAAGATTTCTAATGTGCCTATTATATTTATCAGTTCTCGA
ACGGATAATATGGATCAAATTATGGCTATCCAAATGGGTGGCGATGACTTCATAGAAAAGCCATTTAATTTATCATTAAC
GGTTGCTAAAGTTCAAGCATTACTTCGTCGTACCTATGATTTAGCAGTTTCCAATGATGAATTAACTGTCAAAGGTTGTA
AGTTAATTATTGATGAGGCCAAAATTATTTATAACGAAGAAGCAATACAATTATCTTTAACAGAACTTCAAATCATAAAG
TTATTATTCCAAAATGAAGGGAAATTCGTTAAACGCAATGCTTTGATTGAAAAATGTTGGGAATCTGAAAATTATATAGA
TGATAATACATTAGCCGTTAATATGACGCGACTGCGCAAGAAATTAAATCAAATTGATTTAAAAGACTTTATTGAAACGA
AGAAAAATGTTGGATATAGGGTATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A654C6R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

80.09

100

0.801