Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | I6J08_RS02665 | Genome accession | NZ_CP068219 |
| Coordinates | 517964..519031 (+) | Length | 355 a.a. |
| NCBI ID | WP_029055748.1 | Uniprot ID | A0A654ATJ4 |
| Organism | Staphylococcus pasteuri strain FDAARGOS_1151 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 512964..524031
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J08_RS02635 (I6J08_02635) | - | 513391..514845 (+) | 1455 | WP_017636257.1 | rhomboid family protein | - |
| I6J08_RS02640 (I6J08_02640) | - | 514835..515038 (+) | 204 | WP_017636256.1 | YqgQ family protein | - |
| I6J08_RS02645 (I6J08_02645) | - | 515035..516021 (+) | 987 | WP_017636255.1 | ROK family glucokinase | - |
| I6J08_RS02650 (I6J08_02650) | - | 516021..516344 (+) | 324 | WP_017636254.1 | MTH1187 family thiamine-binding protein | - |
| I6J08_RS02655 (I6J08_02655) | - | 516348..516971 (+) | 624 | WP_017636253.1 | MBL fold metallo-hydrolase | - |
| I6J08_RS02660 (I6J08_02660) | comGA | 517018..517992 (+) | 975 | WP_070453859.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I6J08_RS02665 (I6J08_02665) | comGB | 517964..519031 (+) | 1068 | WP_029055748.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| I6J08_RS02670 (I6J08_02670) | comGC | 519100..519366 (+) | 267 | WP_046466868.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I6J08_RS02675 (I6J08_02675) | comGD | 519356..519793 (+) | 438 | WP_046466732.1 | competence type IV pilus minor pilin ComGD | - |
| I6J08_RS02680 (I6J08_02680) | - | 519840..520073 (+) | 234 | WP_119483297.1 | hypothetical protein | - |
| I6J08_RS02685 (I6J08_02685) | - | 520647..521165 (+) | 519 | WP_181299894.1 | shikimate kinase | - |
| I6J08_RS02690 (I6J08_02690) | gcvT | 521337..522428 (+) | 1092 | WP_017636954.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| I6J08_RS02695 (I6J08_02695) | gcvPA | 522447..523796 (+) | 1350 | WP_017636955.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 42124.90 Da Isoelectric Point: 9.3128
>NTDB_id=528174 I6J08_RS02665 WP_029055748.1 517964..519031(+) (comGB) [Staphylococcus pasteuri strain FDAARGOS_1151]
MKLLLINIFKFRQAKCLTKSEQLDLVYRLHQLLKHGFTLYESFKFLNLHFKYRGDKSHDEVLNKIEQGATCWEVFKYLDY
SSDIVTQTYLAERFGNLELSLLEATRYLKKQIQVTQNVLKTIQYPIVLIITFILILTLLNFTVIPQFKELYQSMNIELSP
LQSILSYFITTFPLFIIILSSVICILSIIFKYRFNKMTIENQIQLMCHIPIIKHYYKILKTYQLSNEFAHFYRNGVNLQI
IVRIYKQSENNQFHQFLGDRLLNQSYQGENLPDILKKLNCYENDLIKFIEQGEKSGKLDIELTLYSQILIQQFEAMAKRH
IKFIQPVIFLILGLFIVALYLTIMLPIFDMLQSIK
MKLLLINIFKFRQAKCLTKSEQLDLVYRLHQLLKHGFTLYESFKFLNLHFKYRGDKSHDEVLNKIEQGATCWEVFKYLDY
SSDIVTQTYLAERFGNLELSLLEATRYLKKQIQVTQNVLKTIQYPIVLIITFILILTLLNFTVIPQFKELYQSMNIELSP
LQSILSYFITTFPLFIIILSSVICILSIIFKYRFNKMTIENQIQLMCHIPIIKHYYKILKTYQLSNEFAHFYRNGVNLQI
IVRIYKQSENNQFHQFLGDRLLNQSYQGENLPDILKKLNCYENDLIKFIEQGEKSGKLDIELTLYSQILIQQFEAMAKRH
IKFIQPVIFLILGLFIVALYLTIMLPIFDMLQSIK
Nucleotide
Download Length: 1068 bp
>NTDB_id=528174 I6J08_RS02665 WP_029055748.1 517964..519031(+) (comGB) [Staphylococcus pasteuri strain FDAARGOS_1151]
GTGAAACTATTGCTGATAAATATATTTAAATTCAGACAAGCCAAATGCCTAACTAAATCTGAACAATTAGATTTAGTGTA
TAGATTACATCAATTACTTAAACATGGATTTACTCTTTACGAATCATTTAAATTTTTAAATCTACATTTTAAATATAGAG
GAGATAAATCACATGATGAAGTGTTAAATAAAATAGAACAAGGTGCAACTTGCTGGGAAGTATTTAAATACTTAGATTAT
TCAAGTGACATTGTTACACAAACATATTTAGCTGAAAGATTTGGAAATTTAGAACTTTCTCTATTAGAAGCTACAAGATA
TTTAAAAAAGCAAATACAAGTTACTCAAAATGTTTTAAAGACGATACAGTATCCTATTGTATTAATAATTACTTTTATAT
TAATATTAACGTTACTCAATTTTACAGTTATACCTCAATTTAAAGAATTATACCAATCTATGAATATAGAACTTTCTCCA
TTACAATCTATTCTTTCTTATTTTATTACAACTTTCCCTTTATTCATCATAATTTTATCCAGTGTAATATGTATATTATC
TATCATATTTAAATATCGTTTTAATAAGATGACTATAGAAAATCAAATTCAATTAATGTGTCACATTCCAATTATTAAAC
ATTATTATAAAATTTTAAAAACGTATCAATTATCAAATGAGTTTGCCCATTTTTATAGAAATGGAGTTAATTTACAGATA
ATCGTTAGAATTTATAAACAATCAGAGAATAATCAATTTCATCAATTTTTAGGAGACAGGTTACTCAACCAATCTTATCA
AGGAGAAAATCTACCTGATATATTAAAAAAATTAAATTGCTATGAAAATGACTTGATTAAATTTATAGAACAAGGAGAAA
AAAGTGGAAAACTTGATATCGAATTAACGCTATATAGTCAGATACTTATACAACAATTCGAAGCTATGGCTAAAAGACAC
ATTAAATTCATTCAACCAGTTATCTTTTTAATATTAGGATTATTTATCGTTGCACTTTATTTAACTATTATGCTACCTAT
ATTTGACATGTTGCAGTCAATTAAATAG
GTGAAACTATTGCTGATAAATATATTTAAATTCAGACAAGCCAAATGCCTAACTAAATCTGAACAATTAGATTTAGTGTA
TAGATTACATCAATTACTTAAACATGGATTTACTCTTTACGAATCATTTAAATTTTTAAATCTACATTTTAAATATAGAG
GAGATAAATCACATGATGAAGTGTTAAATAAAATAGAACAAGGTGCAACTTGCTGGGAAGTATTTAAATACTTAGATTAT
TCAAGTGACATTGTTACACAAACATATTTAGCTGAAAGATTTGGAAATTTAGAACTTTCTCTATTAGAAGCTACAAGATA
TTTAAAAAAGCAAATACAAGTTACTCAAAATGTTTTAAAGACGATACAGTATCCTATTGTATTAATAATTACTTTTATAT
TAATATTAACGTTACTCAATTTTACAGTTATACCTCAATTTAAAGAATTATACCAATCTATGAATATAGAACTTTCTCCA
TTACAATCTATTCTTTCTTATTTTATTACAACTTTCCCTTTATTCATCATAATTTTATCCAGTGTAATATGTATATTATC
TATCATATTTAAATATCGTTTTAATAAGATGACTATAGAAAATCAAATTCAATTAATGTGTCACATTCCAATTATTAAAC
ATTATTATAAAATTTTAAAAACGTATCAATTATCAAATGAGTTTGCCCATTTTTATAGAAATGGAGTTAATTTACAGATA
ATCGTTAGAATTTATAAACAATCAGAGAATAATCAATTTCATCAATTTTTAGGAGACAGGTTACTCAACCAATCTTATCA
AGGAGAAAATCTACCTGATATATTAAAAAAATTAAATTGCTATGAAAATGACTTGATTAAATTTATAGAACAAGGAGAAA
AAAGTGGAAAACTTGATATCGAATTAACGCTATATAGTCAGATACTTATACAACAATTCGAAGCTATGGCTAAAAGACAC
ATTAAATTCATTCAACCAGTTATCTTTTTAATATTAGGATTATTTATCGTTGCACTTTATTTAACTATTATGCTACCTAT
ATTTGACATGTTGCAGTCAATTAAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Staphylococcus aureus MW2 |
48.315 |
100 |
0.485 |
| comGB | Staphylococcus aureus N315 |
48.315 |
100 |
0.485 |