Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   I6J08_RS00710 Genome accession   NZ_CP068219
Coordinates   137025..137741 (-) Length   238 a.a.
NCBI ID   WP_017638099.1    Uniprot ID   A0A654BEB4
Organism   Staphylococcus pasteuri strain FDAARGOS_1151     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 132025..142741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J08_RS00695 (I6J08_00695) - 133443..134393 (+) 951 WP_017638102.1 LacI family DNA-binding transcriptional regulator -
  I6J08_RS00700 (I6J08_00700) - 134513..135997 (+) 1485 WP_108017237.1 sucrose-6-phosphate hydrolase -
  I6J08_RS00705 (I6J08_00705) - 135994..136953 (+) 960 WP_017638100.1 carbohydrate kinase family protein -
  I6J08_RS00710 (I6J08_00710) agrA 137025..137741 (-) 717 WP_017638099.1 quorum-sensing response regulator AgrA Regulator
  I6J08_RS00715 (I6J08_00715) agrC 137754..139043 (-) 1290 WP_017638098.1 quorum-sensing sensor histidine kinase AgrC -
  I6J08_RS00720 (I6J08_00720) agrD 139067..139207 (-) 141 WP_017638097.1 cyclic lactone autoinducer peptide AgrD -
  I6J08_RS00725 (I6J08_00725) - 139212..139775 (-) 564 WP_017638096.1 accessory gene regulator AgrB -
  I6J08_RS00730 (I6J08_00730) - 140093..140170 (+) 78 WP_015364840.1 delta-lysin family phenol-soluble modulin -
  I6J08_RS00735 (I6J08_00735) - 140235..140312 (+) 78 WP_072291871.1 delta-lysin family phenol-soluble modulin -
  I6J08_RS00740 (I6J08_00740) - 140710..141495 (-) 786 WP_159333693.1 carbon-nitrogen family hydrolase -
  I6J08_RS00745 (I6J08_00745) - 141610..142236 (-) 627 WP_017638094.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27928.93 Da        Isoelectric Point: 5.6599

>NTDB_id=528163 I6J08_RS00710 WP_017638099.1 137025..137741(-) (agrA) [Staphylococcus pasteuri strain FDAARGOS_1151]
MKIFICEDDPKQRENMTSIIKNYIMIEEKPMELALATDDPYEVLEQSKEMNDIGCYFLDIQLEADINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELKTRIIDCLETAHTRLKLLSKESNVETIELKRGSNSVYVQYDDIM
FFESSSKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRRNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=528163 I6J08_RS00710 WP_017638099.1 137025..137741(-) (agrA) [Staphylococcus pasteuri strain FDAARGOS_1151]
ATGAAAATTTTCATTTGCGAAGATGATCCAAAACAAAGAGAGAATATGACTTCAATTATTAAAAATTATATCATGATTGA
GGAAAAACCTATGGAGCTTGCTCTCGCAACTGATGATCCTTATGAAGTGCTTGAGCAATCAAAAGAAATGAATGATATCG
GTTGTTATTTCTTAGATATCCAACTCGAAGCAGATATTAATGGTATTAAATTAGGTAGTGAAATTCGCAAACATGATCCT
GTCGGCAATATTATCTTTGTTACAAGTCATAGCGAACTAACATACCTCACCTTTGTATATAAAGTGGCAGCGATGGATTT
CATATTTAAAGATGACCCAGCAGAACTGAAAACACGAATTATTGATTGTTTAGAAACCGCTCACACAAGACTTAAGTTAT
TATCAAAAGAAAGTAATGTTGAAACAATCGAATTAAAACGTGGAAGTAATTCAGTGTATGTACAATATGACGATATTATG
TTTTTCGAATCATCTAGCAAATCACATCGTTTAATCGCCCATTTAGATAATAGACAAATCGAATTTTATGGTAATCTTAA
AGAATTAAGTCAATTAGATGACCGCTTCTTTAGGTGCCACAATAGTTTTGTAGTTAATCGAAGAAACATAGAATCAATTG
ATTCAAAAGAACGTATTGTCTATTTCAAAAACAAAGAACATTGTTATGCATCTGTTCGAAATGTTAAAAAAATCTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A654BEB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

93.697

100

0.937