Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   I6J09_RS06600 Genome accession   NZ_CP068216
Coordinates   1357159..1358052 (-) Length   297 a.a.
NCBI ID   WP_119622704.1    Uniprot ID   -
Organism   Staphylococcus pasteuri strain FDAARGOS_1152     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1352159..1363052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J09_RS06585 (I6J09_06580) - 1353371..1354165 (-) 795 WP_119622707.1 DUF4064 domain-containing protein -
  I6J09_RS06590 (I6J09_06585) - 1354300..1356294 (-) 1995 WP_208969655.1 FtsX-like permease family protein -
  I6J09_RS06595 (I6J09_06590) - 1356300..1357052 (-) 753 WP_017637232.1 ABC transporter ATP-binding protein -
  I6J09_RS06600 (I6J09_06595) braS 1357159..1358052 (-) 894 WP_119622704.1 sensor histidine kinase Regulator
  I6J09_RS06605 (I6J09_06600) braR 1358058..1358723 (-) 666 WP_046466948.1 response regulator transcription factor Regulator
  I6J09_RS06610 (I6J09_06605) - 1358745..1358912 (-) 168 WP_017637236.1 hypothetical protein -
  I6J09_RS06615 (I6J09_06610) - 1359179..1360633 (+) 1455 WP_029055919.1 alkaline phosphatase -
  I6J09_RS06620 (I6J09_06615) - 1360725..1360826 (-) 102 WP_017637237.1 SE2200 family small protein -
  I6J09_RS06625 (I6J09_06620) - 1361060..1361509 (-) 450 WP_017637238.1 MarR family winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 297 a.a.        Molecular weight: 34378.92 Da        Isoelectric Point: 6.3049

>NTDB_id=528147 I6J09_RS06600 WP_119622704.1 1357159..1358052(-) (braS) [Staphylococcus pasteuri strain FDAARGOS_1152]
MMLPFIKTIKNEIAIVTLILLLFAVIFFVFSLSMSALLLGIAIVLFIMLIYWWISYLGFQKQVNLKHKIEVLEEELFETK
KRQAEYQKDIESYFLTWVHQIKTPITATQLLLERNEHNVVNQVRQEIVQIDNYTSLALSYLKLLNEASDMSISEVKIDEL
IKPLIMKYRVHFIEQNTKIHYQSVDDNVLTDAQWASILIEQLLNNALKYARGKDIWINFNSETKQLYIKDNGIGISQADL
PKIFDKGYSGYNGSLNESSSGIGLFIVKHISQHLNLNVEVESKLNSGTHFTIDFPRE

Nucleotide


Download         Length: 894 bp        

>NTDB_id=528147 I6J09_RS06600 WP_119622704.1 1357159..1358052(-) (braS) [Staphylococcus pasteuri strain FDAARGOS_1152]
ATGATGTTACCTTTTATAAAAACAATTAAAAATGAAATTGCAATCGTCACATTAATATTATTATTATTTGCTGTGATCTT
TTTTGTATTTTCACTTTCAATGAGTGCATTGCTGCTTGGTATTGCTATTGTTTTATTTATTATGCTGATTTATTGGTGGA
TTAGTTATTTAGGATTTCAAAAACAAGTTAATCTTAAACATAAAATAGAGGTACTTGAAGAAGAATTATTTGAAACAAAA
AAACGACAAGCTGAATATCAAAAAGATATTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATTACTGC
CACCCAATTATTATTAGAACGTAATGAACATAATGTTGTTAATCAAGTAAGACAAGAAATAGTACAAATAGATAATTATA
CTAGTCTAGCATTAAGTTATTTGAAATTACTTAATGAAGCTTCTGATATGAGTATTTCAGAAGTAAAAATTGACGAGTTA
ATCAAGCCTTTAATTATGAAGTATCGTGTACATTTTATTGAACAAAATACTAAAATCCATTATCAATCAGTTGATGATAA
CGTATTAACCGATGCACAATGGGCATCTATATTAATAGAACAGTTGTTAAATAATGCATTAAAGTATGCACGTGGCAAAG
ATATTTGGATTAACTTTAACTCAGAAACAAAACAATTATATATCAAAGATAATGGTATAGGTATTAGCCAAGCAGATTTA
CCAAAAATCTTTGACAAAGGATATTCTGGATATAATGGGAGTCTTAATGAATCATCTAGTGGTATAGGTTTATTTATTGT
TAAACACATATCTCAACATCTTAATTTAAACGTTGAAGTAGAATCAAAATTAAACAGTGGTACGCATTTTACGATTGATT
TTCCAAGAGAATGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60.678

99.327

0.603