NTDB

Overview

Name	pilA	Type	Machinery gene
Locus tag	K7H19_RS02265	Genome accession	NZ_CP082323
Coordinates	411530..412444 (-)	Length	304 a.a.
NCBI ID	WP_011227933.1	Uniprot ID	Q5SL57
Organism	Thermus thermophilus strain N-1
Function	assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 406530..417444

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7H19_RS02235 (K7H19_02235)	hisH	407160..407756 (+)	597	WP_011172519.1	imidazole glycerol phosphate synthase subunit HisH	-
K7H19_RS02240 (K7H19_02240)	-	407727..408647 (-)	921	WP_011227930.1	carbohydrate kinase family protein	-
K7H19_RS02245 (K7H19_02245)	guaB	408792..410273 (+)	1482	WP_011227931.1	IMP dehydrogenase	-
K7H19_RS02250 (K7H19_02250)	-	410270..410500 (-)	231	WP_011172522.1	hypothetical protein	-
K7H19_RS02255 (K7H19_02255)	-	410541..411026 (+)	486	WP_011227932.1	hypothetical protein	-
K7H19_RS02260 (K7H19_02260)	-	410971..411396 (-)	426	WP_011172524.1	disulfide bond formation protein B	-
K7H19_RS02265 (K7H19_02265)	pilA	411530..412444 (-)	915	WP_011227933.1	signal recognition particle-docking protein FtsY	Machinery gene
K7H19_RS02270 (K7H19_02270)	-	412444..412884 (-)	441	WP_011227934.1	hypothetical protein	-
K7H19_RS02275 (K7H19_02275)	gltX	412901..414307 (-)	1407	WP_011227935.1	glutamate--tRNA ligase	-
K7H19_RS02280 (K7H19_02280)	lptB	414362..415090 (+)	729	WP_011172528.1	LPS export ABC transporter ATP-binding protein	-
K7H19_RS11755	-	415093..416436 (+)	1344	WP_011227936.1	DUF3084 domain-containing protein	-
K7H19_RS11760	prmC	416338..417231 (-)	894	Protein_438	peptide chain release factor N(5)-glutamine methyltransferase	-

Sequence

Protein

Download Length: 304 a.a. Molecular weight: 32721.17 Da Isoelectric Point: 9.7124

                                >NTDB_id=528121 K7H19_RS02265 WP_011227933.1 411530..412444(-) (pilA) [Thermus thermophilus strain N-1]

MGLFDRLRAGLAKTRERLLKAIPWGGDPEEVLEELEMALLAADVGVAATEELLKEVRASGRRDLKEVVKEKLVQMLEPDE

RRATLRKLGFRPQKLRPVEPQGHVVMVVGVNGVGKTTTIAKLGRLYQGLGKKVLFCAGDTFRAAGGAQLAEWGKRLGIPV

IQGPEGADPAALAFDAAKARRARGLDLLFVDTAGRLHTKQGLMEELKKVKRAIAKADPGEPGEVWLVLDAVTGQNGLEQA

KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLKVPIRFIGVGEGPDDLQPFDAEAFVEALLEA

Nucleotide

Download Length: 915 bp

                                >NTDB_id=528121 K7H19_RS02265 WP_011227933.1 411530..412444(-) (pilA) [Thermus thermophilus strain N-1]

ATGGGCCTCTTTGACCGGCTCAGGGCGGGCCTCGCCAAGACCCGGGAAAGGCTCCTCAAGGCCATCCCCTGGGGCGGCGA

CCCCGAGGAGGTCCTGGAGGAGCTGGAGATGGCCCTCCTCGCCGCCGACGTGGGGGTGGCGGCCACGGAGGAGCTCCTCA

AGGAGGTGCGGGCCTCGGGGCGGCGGGACCTGAAGGAGGTGGTGAAGGAGAAGCTCGTCCAGATGCTGGAGCCGGACGAG

CGGCGGGCCACGCTGAGGAAGCTCGGCTTCCGTCCCCAGAAGCTCCGCCCCGTGGAGCCTCAGGGGCACGTGGTGATGGT

GGTGGGGGTGAACGGGGTGGGCAAGACCACCACCATCGCCAAGCTGGGCCGCCTCTACCAGGGCCTCGGCAAGAAGGTCC

TCTTCTGCGCCGGGGACACCTTCCGCGCCGCGGGGGGAGCCCAGCTTGCGGAGTGGGGGAAGCGCCTCGGGATCCCGGTG

ATCCAGGGCCCGGAAGGGGCGGACCCCGCCGCCCTCGCCTTTGACGCCGCCAAGGCCCGAAGGGCGCGGGGCCTGGACCT

CCTCTTCGTGGACACCGCGGGCCGCCTCCACACCAAGCAGGGCCTCATGGAGGAGCTCAAGAAGGTGAAGCGGGCCATCG

CCAAGGCGGACCCCGGGGAGCCGGGGGAGGTGTGGCTCGTGCTGGACGCCGTCACCGGGCAAAACGGCCTGGAGCAGGCC

AAGCGCTTTCACGAGGCCGTGGGCCTCACCGGGGTCATCGTCACCAAGCTGGACGGGACGGCCAAGGGCGGGGTCCTGGT

CCCCATCGTCCGCACCCTAAAGGTGCCCATCCGCTTCATCGGCGTGGGAGAAGGCCCGGACGACCTCCAGCCCTTTGACG

CCGAGGCCTTCGTGGAGGCCCTCCTCGAGGCCTGA

Domains

Predicted by InterProScan.

SRP54-type protein, helical bundle domain (SRP54_N)

(29-65)

SRP54-type protein, GTPase domain (SRP54)

(103-302)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	Q5SL57

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
pilA	Neisseria gonorrhoeae MS11	48.726	100	0.503

Detailed information NTG0528121