Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I6J13_RS08640 Genome accession   NZ_CP068213
Coordinates   1749952..1750683 (+) Length   243 a.a.
NCBI ID   WP_006269366.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1156     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1744952..1755683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J13_RS08610 (I6J13_08610) - 1745276..1746715 (+) 1440 WP_003070376.1 NCS2 family permease -
  I6J13_RS08615 (I6J13_08615) tsaE 1747052..1747492 (+) 441 WP_006269361.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I6J13_RS08620 (I6J13_08620) - 1747485..1748006 (+) 522 WP_006269358.1 GNAT family N-acetyltransferase -
  I6J13_RS08625 (I6J13_08625) brpA 1748014..1749129 (+) 1116 WP_006269345.1 biofilm formation/cell division transcriptional regulator BrpA -
  I6J13_RS08630 (I6J13_08630) - 1749176..1749463 (-) 288 WP_006269352.1 hypothetical protein -
  I6J13_RS08635 (I6J13_08635) - 1749473..1749883 (-) 411 WP_006269359.1 HIT family protein -
  I6J13_RS08640 (I6J13_08640) pptA 1749952..1750683 (+) 732 WP_006269366.1 ABC transporter ATP-binding protein Regulator
  I6J13_RS08645 (I6J13_08645) - 1750680..1751726 (+) 1047 WP_006269357.1 ABC transporter permease -
  I6J13_RS08650 (I6J13_08650) ccrZ 1751777..1752574 (+) 798 WP_006269344.1 cell cycle regulator CcrZ -
  I6J13_RS08655 (I6J13_08655) trmB 1752571..1753206 (+) 636 WP_003078354.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  I6J13_RS08660 (I6J13_08660) - 1753373..1754899 (-) 1527 WP_115342906.1 IS1182 family transposase -
  I6J13_RS09565 - 1754860..1755041 (+) 182 Protein_1684 hypothetical protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26934.41 Da        Isoelectric Point: 4.6533

>NTDB_id=528070 I6J13_RS08640 WP_006269366.1 1749952..1750683(+) (pptA) [Streptococcus constellatus strain FDAARGOS_1156]
MLEIKGLTGGYVNIPVLKDISFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDNPMAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVDQEVAFARVEQLLTKFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLKDEKAKGKSILMSTHVLDSAERMCDSFVILHKGEIRAKGNLSELQSEFSMPEASLNEIYLALTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=528070 I6J13_RS08640 WP_006269366.1 1749952..1750683(+) (pptA) [Streptococcus constellatus strain FDAARGOS_1156]
ATGTTAGAAATAAAAGGGCTTACAGGGGGCTATGTGAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GGAACTGGTGGGGTTGATTGGTTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATCGGACTTTTAACTCCTT
ATAAAGGGGAAATTTTAATTGACGGCGCTAAACTGCAAGACAATCCCATGGCTTATCGTAAGAAAATTGGATTTATTCCA
GAGACCCCTAGTTTATATGAGGAATTGACTTTAAGAGAGCACATTGAAACAGTTGCTATGGCTTATGATGTCGATCAAGA
GGTAGCTTTTGCGCGCGTGGAGCAATTATTGACCAAGTTTCGCTTAAAAGAAAAATTGGATTGGTTCCCCGTTCACTTTT
CAAAGGGAATGAAGCAAAAAGTCATGATTATTTGCGCCTTTGTAGTTGATCCGAGTCTCTTTATCGTGGATGAGCCATTT
TTGGGACTCGATCCAGTAGCGATTGCTGATTTGATAGAGCTTTTGAAAGATGAAAAGGCAAAAGGCAAGTCTATCCTGAT
GAGTACGCATGTGTTGGACTCAGCAGAAAGAATGTGTGATTCATTCGTGATTTTGCACAAGGGGGAAATCCGAGCGAAAG
GTAACTTATCAGAGTTGCAATCAGAATTTTCTATGCCAGAAGCTAGCCTGAATGAGATCTATCTGGCATTGACGGAAGAG
GCAAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

71.548

98.354

0.704
  pptA Streptococcus salivarius strain HSISS4

71.13

98.354

0.7