Detailed information NTG0528055

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: I6J13_RS06030
• Genome accession: NZ_CP068213
• Coordinates: 1251876..1253294 (-)
• Length: 472 a.a.
• NCBI ID: WP_100207697.1
• Uniprot ID: -
• Organism: Streptococcus constellatus strain FDAARGOS_1156
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1246876..1258294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J13_RS06010 (I6J13_06010)	-	1247631..1248482 (+)	852	WP_006270601.1	putative RNA methyltransferase	-
I6J13_RS06015 (I6J13_06015)	-	1248525..1249205 (-)	681	WP_006268016.1	rhomboid family intramembrane serine protease	-
I6J13_RS06020 (I6J13_06020)	-	1249198..1249725 (-)	528	WP_006270600.1	5-formyltetrahydrofolate cyclo-ligase	-
I6J13_RS06025 (I6J13_06025)	gltX	1250181..1251638 (-)	1458	WP_006270599.1	glutamate--tRNA ligase	-
I6J13_RS06030 (I6J13_06030)	radA	1251876..1253294 (-)	1419	WP_100207697.1	DNA repair protein RadA	Machinery gene
I6J13_RS06035 (I6J13_06035)	-	1253254..1253697 (-)	444	WP_006270612.1	dUTP diphosphatase	-
I6J13_RS06040 (I6J13_06040)	-	1253791..1254825 (-)	1035	WP_006270610.1	S66 peptidase family protein	-
I6J13_RS06045 (I6J13_06045)	-	1255044..1255223 (-)	180	Protein_1203	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	-
I6J13_RS06050 (I6J13_06050)	-	1255308..1256324 (+)	1017	WP_006270605.1	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	-
I6J13_RS06055 (I6J13_06055)	galU	1256352..1257251 (+)	900	WP_006270607.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-

Sequence

Protein

• Length: 472 a.a.
• Molecular weight: 51600.39 Da
• Isoelectric Point: 6.1089

>NTDB_id=528055 I6J13_RS06030 WP_100207697.1 1251876..1253294(-) (radA) [Streptococcus constellatus strain FDAARGOS_1156]
MVCGQVVLEALGIKKEESIIAKKKATFVCQNCEYHSPKYLGRCPNCGAWSSFVEEVEVTEIKNARVSLTGEKSRPMKLAE
VTSINVNRTKTDMDEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSHKGTVLYVSGEESAEQIKLRAERLGDID
SEFYLYAETNMQSIRAEIEKIKPDFLIVDSIQTILSPEISSVQGSVSQVREVTAELMQLAKTNNIATFIVGHMTKEGTLA
GPRTLEHMVDTVLYFEGERQHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVINPSQVFLEERLDGATGSSIVVTMEGTR
PILAEVQALVTPTMFGNAKRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVRLDEPAIDLAVAVAIASSYKEK
PTNPQECYIGEIGLTGEIRRVNRIEQRINEAVKLGFTKIYVPKNSLNGLNIPEKTEVIGVTTIGEVLKKVFG

Nucleotide

• Length: 1419 bp

>NTDB_id=528055 I6J13_RS06030 WP_100207697.1 1251876..1253294(-) (radA) [Streptococcus constellatus strain FDAARGOS_1156]
ATGGTGTGCGGACAGGTGGTTTTGGAAGCACTGGGCATTAAGAAAGAGGAATCTATCATAGCCAAGAAAAAAGCGACATT
TGTTTGTCAAAATTGTGAATATCATTCCCCCAAGTATCTAGGGCGCTGCCCTAACTGTGGGGCTTGGTCTTCTTTTGTCG
AAGAGGTTGAAGTTACAGAGATTAAGAATGCGCGTGTTTCTCTGACAGGGGAAAAAAGTCGACCGATGAAGTTAGCGGAG
GTGACTTCTATCAATGTCAACCGTACCAAGACAGATATGGATGAATTTAACCGCGTCTTGGGCGGTGGCGTGGTGCCAGG
AAGTTTAGTTCTAATCGGAGGAGACCCAGGCATTGGGAAATCTACCCTTTTATTGCAGGTTTCGACCCAACTCTCTCACA
AGGGAACGGTATTGTATGTCAGTGGGGAAGAGTCTGCCGAGCAGATTAAGCTGCGCGCGGAACGTTTAGGGGATATTGAC
AGTGAGTTTTATCTCTATGCTGAGACCAATATGCAGAGTATTCGTGCTGAGATTGAAAAAATTAAACCAGATTTTTTGAT
TGTAGATTCCATTCAGACGATTCTATCGCCAGAAATTTCCAGTGTGCAGGGGTCGGTTTCGCAAGTGCGAGAGGTGACAG
CTGAGCTCATGCAGCTGGCCAAGACCAATAATATCGCGACCTTTATCGTTGGTCACATGACCAAGGAAGGAACCTTAGCT
GGCCCCCGAACGCTAGAGCACATGGTGGACACAGTGCTTTATTTTGAGGGCGAACGTCAGCACACTTTCCGTATCTTGAG
AGCAGTCAAGAACCGCTTTGGCTCAACCAATGAGATTGGCATTTTTGAAATGCAATCTGGCGGGCTAGTTGAGGTTATCA
ACCCCAGCCAAGTCTTTCTGGAAGAGCGGCTGGACGGCGCGACCGGCTCATCCATCGTCGTGACCATGGAAGGAACGCGG
CCGATTTTAGCAGAGGTACAGGCTTTGGTGACACCGACCATGTTCGGCAATGCCAAGCGAACCACGACTGGTCTAGACTT
TAACCGAGCCAGCCTCATCATGGCTGTTCTGGAAAAACGAGCAGGGCTCCTTCTGCAAAATCAAGATGCTTATCTCAAAT
CAGCTGGTGGTGTGCGCTTAGATGAGCCTGCTATTGATTTAGCAGTAGCGGTAGCCATTGCTTCCAGTTATAAGGAAAAG
CCAACCAACCCTCAAGAATGTTATATTGGCGAAATTGGTCTGACAGGCGAAATCCGCCGTGTCAATCGCATTGAGCAGCG
CATCAACGAAGCTGTTAAGTTAGGCTTCACAAAAATTTATGTTCCTAAAAACTCTTTGAACGGATTGAATATTCCCGAAA
AGACTGAAGTTATTGGTGTGACAACGATTGGTGAAGTATTGAAGAAGGTGTTTGGGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (84-237)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (27-54)

• Subunit ChlI of Mg-chelatase (ChlI) (381-444)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus pneumoniae Rx1	90.949	95.975	0.873
radA	Streptococcus pneumoniae D39	90.949	95.975	0.873
radA	Streptococcus pneumoniae R6	90.949	95.975	0.873
radA	Streptococcus pneumoniae TIGR4	90.949	95.975	0.873
radA	Streptococcus mitis SK321	90.949	95.975	0.873
radA	Streptococcus mitis NCTC 12261	90.728	95.975	0.871
radA	Bacillus subtilis subsp. subtilis str. 168	61.488	96.822	0.595