Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   BAJP3144_RS10435 Genome accession   NZ_CP082283
Coordinates   2166241..2166861 (+) Length   206 a.a.
NCBI ID   WP_007611720.1    Uniprot ID   A0AAI8HP04
Organism   Bacillus amyloliquefaciens strain JP3144     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2161241..2171861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAJP3144_RS10400 (BAJP3144_10400) - 2161486..2161659 (+) 174 WP_012117647.1 aspartyl-phosphate phosphatase Spo0E family protein -
  BAJP3144_RS10405 (BAJP3144_10405) - 2161733..2161951 (-) 219 WP_003153994.1 YneF family protein -
  BAJP3144_RS10410 (BAJP3144_10410) sirA 2162037..2162483 (-) 447 WP_021493417.1 sporulation inhibitor of replication protein SirA -
  BAJP3144_RS10415 (BAJP3144_10415) recP/tkt 2162635..2164638 (-) 2004 WP_100261809.1 transketolase Machinery gene
  BAJP3144_RS10420 (BAJP3144_10420) - 2164805..2165038 (-) 234 WP_003153997.1 DUF896 domain-containing protein -
  BAJP3144_RS10425 (BAJP3144_10425) - 2165107..2165757 (-) 651 WP_003153998.1 recombinase family protein -
  BAJP3144_RS10430 (BAJP3144_10430) yneA 2165773..2166084 (-) 312 WP_061862240.1 cell division suppressor protein YneA -
  BAJP3144_RS10435 (BAJP3144_10435) dinR/lexA 2166241..2166861 (+) 621 WP_007611720.1 transcriptional repressor LexA Regulator
  BAJP3144_RS10440 (BAJP3144_10440) - 2167200..2167628 (-) 429 WP_038458127.1 hypothetical protein -
  BAJP3144_RS10445 (BAJP3144_10445) - 2167782..2168231 (+) 450 WP_017417873.1 YndM family protein -
  BAJP3144_RS10450 (BAJP3144_10450) - 2168259..2169089 (-) 831 WP_022553287.1 prohibitin family protein -
  BAJP3144_RS10455 (BAJP3144_10455) - 2169076..2169225 (-) 150 WP_014418013.1 hypothetical protein -
  BAJP3144_RS10460 (BAJP3144_10460) - 2169331..2170155 (-) 825 WP_167409262.1 poly-gamma-glutamate hydrolase family protein -
  BAJP3144_RS10465 (BAJP3144_10465) - 2170465..2170899 (-) 435 WP_003154017.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23046.64 Da        Isoelectric Point: 5.1645

>NTDB_id=528036 BAJP3144_RS10435 WP_007611720.1 2166241..2166861(+) (dinR/lexA) [Bacillus amyloliquefaciens strain JP3144]
MTKLSKRQLDILRFIKEEVKTKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEVLDEEEVQIPKSQ
VVNVPVIGKVTAGIPITAVENIDEYFPLPDRMVPPGEHVFMLEIMGESMIDAGIFDKDYVIVKQQNTANNGEIVVAMTED
DEATVKRFYKEDNYVRLQPENPTMEPIILQNVSILGKVIGVFRAVH

Nucleotide


Download         Length: 621 bp        

>NTDB_id=528036 BAJP3144_RS10435 WP_007611720.1 2166241..2166861(+) (dinR/lexA) [Bacillus amyloliquefaciens strain JP3144]
ATGACGAAGCTATCAAAAAGGCAGCTTGATATCCTGCGTTTTATTAAAGAAGAGGTAAAAACGAAAGGATATCCGCCTTC
TGTAAGAGAGATAGGAGAAGCAGTAGGACTGGCTTCCAGTTCAACCGTGCACGGCCATTTGGCGCGGCTGGAGACAAAAG
GCCTGATCAGACGGGACCCTACTAAACCGAGAGCGATTGAGGTATTGGATGAAGAAGAAGTCCAAATTCCGAAAAGCCAG
GTCGTAAACGTTCCGGTCATCGGGAAAGTGACGGCGGGTATTCCGATTACGGCTGTTGAAAATATCGACGAGTATTTTCC
GCTTCCCGACCGGATGGTTCCTCCCGGCGAACATGTCTTTATGTTAGAAATCATGGGAGAAAGTATGATTGACGCCGGCA
TTTTTGACAAAGATTACGTCATCGTCAAACAGCAGAACACGGCCAATAACGGAGAAATCGTCGTAGCTATGACCGAAGAT
GATGAAGCGACGGTCAAGCGCTTCTATAAAGAAGACAATTATGTGCGGCTGCAGCCGGAAAATCCGACGATGGAGCCGAT
TATCCTGCAAAACGTAAGCATTTTGGGGAAAGTTATCGGCGTATTCAGAGCCGTACATTAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(85-199)

LexA DNA binding domain (LexA_DNA_bind)

(1-65)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AAI8HP04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

92.718

100

0.927