Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   I6I49_RS09770 Genome accession   NZ_CP068206
Coordinates   1594332..1596554 (-) Length   740 a.a.
NCBI ID   WP_201953404.1    Uniprot ID   -
Organism   Acinetobacter johnsonii strain FDAARGOS_1092     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1589332..1601554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I49_RS09745 (I6I49_09735) - 1589366..1589722 (-) 357 WP_004978810.1 chaperone modulator CbpM -
  I6I49_RS09750 (I6I49_09740) - 1589733..1590686 (-) 954 WP_201953392.1 DnaJ C-terminal domain-containing protein -
  I6I49_RS09755 (I6I49_09745) - 1590830..1591282 (-) 453 WP_201953395.1 DUF2147 domain-containing protein -
  I6I49_RS09760 (I6I49_09750) - 1591482..1592357 (-) 876 WP_201953399.1 Hsp33 family molecular chaperone HslO -
  I6I49_RS09765 (I6I49_09755) - 1592408..1594249 (-) 1842 WP_201953402.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  I6I49_RS09770 (I6I49_09760) priA 1594332..1596554 (-) 2223 WP_201953404.1 primosomal protein N' Machinery gene
  I6I49_RS09775 (I6I49_09765) gspF 1596707..1597912 (+) 1206 WP_004692652.1 type II secretion system inner membrane protein GspF -
  I6I49_RS09780 (I6I49_09770) gspG 1597946..1598383 (+) 438 WP_010325797.1 type II secretion system major pseudopilin GspG -
  I6I49_RS09785 (I6I49_09775) - 1598667..1599002 (+) 336 WP_201953407.1 hypothetical protein -
  I6I49_RS09790 (I6I49_09780) - 1599163..1599501 (+) 339 WP_201953409.1 tRNA-binding protein -
  I6I49_RS09795 (I6I49_09785) lnt 1599568..1601127 (-) 1560 WP_201953412.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84149.05 Da        Isoelectric Point: 8.8808

>NTDB_id=527981 I6I49_RS09770 WP_201953404.1 1594332..1596554(-) (priA) [Acinetobacter johnsonii strain FDAARGOS_1092]
MPENTLSTTPSYRIRVAVPVYLYDCFDYSLTAEQYHQAEVGARVAVSFGRQNVVGVIVEKLTDEKPLDLGFKLKAITELL
DDSAILDAKVLSLLTWSAQYYQFPIGEVMHAALPSFLRQGKPYNLLARMWKLIDDHAEDKLKRSEKQQDAYKILKLHPTG
TSENILNLAGIETATLKALEKKQITQCILEAQDFKPQAMTLAQMPLTPNDEQKRAIQNILKARHSYHAFLLDGLTGSGKT
EVYLQVMQEVLKQGKQVLVLVPEIGLTPQTVSRFQSRFHCHIALLHSGLNDSKRLQAWQSAQTGRASIVIGTRSAIYTPL
PHLGLIVLDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSIDSYALVEQGKMTRLELDQRAGVAVMPKMHV
IDLKVAQKQNGISQQLIHEVQKRLDKKEQVLIFLNRRGYAPVLICESCGWQAKCPHCDANFTVHRQPYQHLHCHHCGTIH
RMPEHCPQCQHTELKPIGLGTAKVEESLQALFPNFDVIRVDRDSTSRVGSWQKIYNKIQKSEPIILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIIQVAGRAGRGEKKGEVYLQTLRPDHPLLNTLLESGYRSFAKQTLKERKAAWM
PPYRYAALLRCESKDQELNQSFLQEHAQVLRQASENSIDIWGPIPAPMERKAGRYQAHMVLLSKDRARMHFYIRQWWQNV
WHNKPHGMKLSLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=527981 I6I49_RS09770 WP_201953404.1 1594332..1596554(-) (priA) [Acinetobacter johnsonii strain FDAARGOS_1092]
ATGCCAGAAAATACACTTTCCACAACACCAAGCTACCGTATTCGTGTGGCTGTTCCAGTTTATCTATATGACTGTTTTGA
CTATAGTTTAACGGCTGAACAATACCACCAAGCTGAAGTGGGTGCACGTGTGGCTGTCTCATTTGGTCGCCAAAATGTGG
TCGGTGTCATTGTTGAGAAACTCACTGATGAGAAACCACTCGATTTAGGCTTTAAACTCAAAGCCATAACTGAGTTGCTC
GATGACAGCGCTATTCTAGATGCTAAAGTTTTAAGTTTATTGACATGGTCAGCGCAATATTACCAATTTCCCATTGGTGA
AGTGATGCATGCTGCTTTGCCCAGCTTTTTACGCCAAGGCAAACCCTATAATTTACTGGCGCGGATGTGGAAGCTGATTG
ATGATCATGCCGAAGACAAATTGAAGCGTTCTGAAAAACAACAAGATGCCTATAAAATTTTAAAGCTGCATCCCACAGGA
ACGTCTGAAAACATTTTAAATTTGGCTGGCATTGAAACTGCGACCTTAAAAGCCTTAGAAAAAAAGCAAATCACCCAGTG
CATACTTGAAGCCCAAGACTTTAAACCGCAAGCCATGACACTGGCACAAATGCCCCTCACGCCCAATGATGAACAAAAGC
GTGCCATTCAAAATATTCTCAAAGCTCGTCATAGCTACCACGCTTTCTTACTGGATGGTTTAACCGGTAGTGGCAAAACT
GAAGTCTACTTGCAAGTCATGCAAGAGGTTTTAAAACAAGGCAAACAAGTTTTGGTATTAGTGCCTGAAATTGGCCTCAC
CCCACAAACAGTGAGTCGTTTTCAGTCACGTTTTCACTGTCATATTGCGCTACTACATTCAGGTTTAAATGATTCTAAGC
GCCTTCAAGCCTGGCAAAGCGCACAAACAGGCAGAGCTTCGATTGTGATTGGCACACGTTCTGCCATCTATACGCCCCTT
CCGCATTTGGGTTTGATTGTCTTAGATGAAGAGCATGACTTATCTTTCAAGCAACAAGAAGGCTTCCGCTACCACGCTCG
TGATGTGGCTTTATACCGTGCACACTTAGAAAACTGTCCGATTATCCTCGGTTCTGCAACGCCAAGTATCGACAGTTATG
CGTTGGTCGAACAAGGTAAAATGACCCGTTTGGAGTTGGACCAACGTGCAGGTGTGGCCGTGATGCCGAAAATGCATGTG
ATCGATCTGAAAGTGGCACAAAAACAAAATGGCATCAGCCAACAGCTGATTCATGAAGTACAAAAGCGCTTAGACAAAAA
AGAACAGGTGCTGATTTTTTTAAATCGTCGCGGCTATGCGCCTGTGTTGATTTGTGAAAGTTGTGGCTGGCAGGCCAAGT
GCCCACATTGCGATGCCAATTTTACCGTGCATCGACAGCCCTATCAGCATCTCCACTGTCACCACTGCGGCACCATCCAC
CGCATGCCTGAACACTGCCCGCAATGTCAGCATACCGAACTGAAACCAATTGGTTTAGGCACCGCAAAAGTTGAAGAAAG
CCTACAAGCACTGTTCCCAAATTTTGACGTAATTCGGGTGGATCGTGACTCGACCAGTCGAGTCGGCAGCTGGCAAAAAA
TCTATAACAAGATTCAGAAAAGTGAACCCATCATTTTGCTCGGCACCCAAATGCTGGCAAAAGGACATCACTTTCCTTAT
GTGACTTTAGTGGCGATTTTAGACATCGACTCGGGCTTACTCAGTGTTGACTTTCGCGCCACAGAACGTACCGCACAGCT
CATCATCCAAGTCGCTGGACGTGCTGGGCGCGGTGAGAAAAAAGGCGAAGTCTATTTACAAACTCTACGTCCCGATCATC
CTTTGCTGAATACCCTGCTGGAATCGGGCTATCGCAGCTTTGCCAAGCAAACGTTGAAAGAGCGTAAAGCTGCATGGATG
CCACCTTATCGCTATGCGGCTTTATTGCGCTGTGAATCCAAAGACCAAGAACTGAACCAAAGCTTTTTACAAGAGCATGC
ACAAGTACTGCGCCAAGCCTCAGAAAACAGTATTGATATTTGGGGGCCCATTCCTGCGCCGATGGAACGTAAAGCAGGCC
GCTATCAAGCGCATATGGTACTACTGTCCAAAGACCGTGCGCGGATGCATTTTTACATTCGTCAGTGGTGGCAAAATGTC
TGGCATAACAAACCGCATGGTATGAAATTGAGCCTTGATATTGATCCACAAGAGTTAAGTTAA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

DEAD/DEAH box helicase (DEAD)

(210-371)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.819

98.784

0.709