Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   I6I49_RS05125 Genome accession   NZ_CP068206
Coordinates   644541..645398 (-) Length   285 a.a.
NCBI ID   WP_004691238.1    Uniprot ID   A0AAW6JCY5
Organism   Acinetobacter johnsonii strain FDAARGOS_1092     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 639541..650398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I49_RS05105 (I6I49_05105) miaB 640874..642331 (+) 1458 WP_201952576.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  I6I49_RS05110 (I6I49_05110) - 642370..643446 (+) 1077 WP_004977846.1 PhoH family protein -
  I6I49_RS05115 (I6I49_05115) ybeY 643504..643983 (+) 480 WP_114837372.1 rRNA maturation RNase YbeY -
  I6I49_RS05120 (I6I49_05120) - 644085..644495 (+) 411 WP_114837381.1 hypothetical protein -
  I6I49_RS05125 (I6I49_05125) tonB2 644541..645398 (-) 858 WP_004691238.1 energy transducer TonB Machinery gene
  I6I49_RS05130 (I6I49_05130) - 645659..646336 (+) 678 WP_004977854.1 hypothetical protein -
  I6I49_RS05135 (I6I49_05135) - 646492..647202 (+) 711 WP_078426185.1 DUF3108 domain-containing protein -
  I6I49_RS05140 (I6I49_05140) - 647281..648027 (+) 747 WP_201952579.1 IS5-like element ISAba31 family transposase -
  I6I49_RS05145 (I6I49_05145) - 648154..648729 (+) 576 WP_004691243.1 xanthine phosphoribosyltransferase -
  I6I49_RS05150 (I6I49_05150) - 649005..650057 (+) 1053 WP_227557050.1 sensor domain-containing diguanylate cyclase -

Sequence

Protein


Download         Length: 285 a.a.        Molecular weight: 32599.13 Da        Isoelectric Point: 6.6632

>NTDB_id=527965 I6I49_RS05125 WP_004691238.1 644541..645398(-) (tonB2) [Acinetobacter johnsonii strain FDAARGOS_1092]
MPLAHDWWKDPIFTATVVLAVFLHLVILTLQFAMPQENDAAVKEIAVTLRPSDKKIENADFLAQADQQGSGTFRESHRMS
SDMPAPMLEQSTGEQQRETLEQIQQKRELNFEEKLLMTTLSWQKQAEDNQRKKAMEEMNSQFQAKAAMVASLEAQYLQRQ
QNFSRQQKIKTVDGIQAKQDISAAYLEKFRQKVEFYGNRYYPEAAKQQRLAGEVRLMVILNASGGIRAIRLIDSSGHEML
DEAAKASVRKAAPFGGFDAKMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 858 bp        

>NTDB_id=527965 I6I49_RS05125 WP_004691238.1 644541..645398(-) (tonB2) [Acinetobacter johnsonii strain FDAARGOS_1092]
ATGCCTTTGGCTCATGATTGGTGGAAAGACCCAATTTTTACAGCGACCGTCGTACTGGCGGTATTTTTGCATCTCGTGAT
TTTGACTTTGCAATTTGCTATGCCTCAAGAAAATGATGCGGCAGTGAAAGAAATTGCTGTCACTTTACGCCCTTCTGATA
AAAAAATTGAAAATGCAGATTTTTTAGCGCAAGCCGATCAACAAGGTTCAGGTACCTTTCGTGAGTCACATCGTATGTCG
AGTGACATGCCCGCACCGATGCTTGAGCAAAGTACAGGCGAACAGCAGCGTGAAACTTTAGAGCAGATCCAACAAAAACG
TGAACTGAATTTTGAAGAAAAACTGTTGATGACGACTTTAAGTTGGCAAAAACAAGCTGAGGATAATCAGCGCAAAAAAG
CCATGGAAGAAATGAACAGTCAGTTTCAAGCCAAAGCAGCAATGGTGGCCAGCCTTGAAGCGCAATATTTACAACGCCAA
CAAAACTTTAGTCGTCAGCAAAAAATTAAAACAGTCGATGGTATTCAAGCCAAGCAAGATATTTCGGCCGCCTATCTTGA
AAAGTTCCGTCAGAAAGTGGAGTTTTATGGCAACCGTTACTATCCAGAAGCAGCTAAACAGCAGCGGCTGGCGGGTGAAG
TGCGTTTAATGGTGATTCTAAATGCATCAGGAGGCATCCGTGCTATTCGCCTGATTGATAGTTCAGGTCATGAGATGCTC
GATGAGGCGGCAAAAGCATCGGTACGTAAGGCTGCACCATTTGGTGGATTTGATGCCAAAATGAAGGATATTTCTGAGTT
ACGCATTGTGCGTACATGGCGTTTTGACCCAGCAGAGGCAGAGTTTGAAGTGCACTGA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(198-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

74.286

98.246

0.73