Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   I6I50_RS10690 Genome accession   NZ_CP068195
Coordinates   2228929..2233434 (+) Length   1501 a.a.
NCBI ID   WP_201706204.1    Uniprot ID   -
Organism   Acinetobacter johnsonii strain FDAARGOS_1093     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2223929..2238434
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I50_RS10665 (I6I50_10665) - 2224399..2225037 (-) 639 WP_087010454.1 hypothetical protein -
  I6I50_RS10670 (I6I50_10670) pilG 2225318..2225701 (+) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  I6I50_RS10675 (I6I50_10675) - 2225729..2226097 (+) 369 WP_004694491.1 response regulator -
  I6I50_RS10680 (I6I50_10680) - 2226103..2226639 (+) 537 WP_004694490.1 chemotaxis protein CheW -
  I6I50_RS10685 (I6I50_10685) - 2226690..2228762 (+) 2073 WP_004981158.1 methyl-accepting chemotaxis protein -
  I6I50_RS10690 (I6I50_10690) chpA 2228929..2233434 (+) 4506 WP_201706204.1 Hpt domain-containing protein Regulator
  I6I50_RS10695 (I6I50_10695) - 2233439..2233900 (+) 462 WP_201706205.1 hypothetical protein -
  I6I50_RS10700 (I6I50_10700) dapE 2233960..2235093 (-) 1134 WP_201706206.1 succinyl-diaminopimelate desuccinylase -
  I6I50_RS10705 (I6I50_10705) - 2235211..2235357 (-) 147 WP_010326244.1 entericidin A/B family lipoprotein -
  I6I50_RS10710 (I6I50_10710) - 2235515..2236393 (-) 879 WP_201706207.1 DUF1853 family protein -
  I6I50_RS10715 (I6I50_10715) - 2236491..2236883 (+) 393 WP_148826485.1 YbaN family protein -
  I6I50_RS10720 (I6I50_10720) elsL 2236883..2237386 (+) 504 WP_201706208.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 167680.19 Da        Isoelectric Point: 4.3722

>NTDB_id=527954 I6I50_RS10690 WP_201706204.1 2228929..2233434(+) (chpA) [Acinetobacter johnsonii strain FDAARGOS_1093]
MKEILKHLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELDPLFEKWYAEPTHQETLLSIRRHFHTLKGSGRMVGAKSA
GETAWGVEDTLNRVISGAVPLTATVQKFAKTVFKLYQFKLYPTFKAVQEIDLDLRPLVLIGQQLQQNQSLEPALEELLQL
SNHLNSNDVVTGLELSDIEVAESEPQVADVSEQDDQVHDVLEETLAIFIEEAEDHLATIDQFLNADETKVQDYNGLIRAL
HTLRGSSSMAQIEHVFNASSKVENLFKTLVQEEIVSTSKEISLLTQYAEFVRDYLHVLGRGTNEQLDVIYATFTTAWDNY
GFSIEDVDDELNPQGMVSKLIELNIDLLLDAEFEFDQRAKVEYPEYIQHLGEQAKQLLEFTNNRAAQGIHDFTSELYAGY
QALLEKPELLNVDYAYELFGQAHQEFIHLFDTLAAGQRVILTEEVHKVLNELMAFVQQDVESTSTTVTEPVAEAIVSGNT
LQPSLDLAQISQQIASDHQYKQSNTANTDFDDDLLDIFLEEAEELLMGMDQDLNTWSKNGNDPAALNNLMRYLHTLKGGA
NMISAPFIGSIAHELESIYERVIRQQIATTPQLISIIRLVQDDVADRIQVIRTEKVDYPATATINVLHNIQNLVEGTTVT
TSASEPLVEAFVAAIEEAQPPVQEPLSNVDRIIEVETETAAVESATATEEPSVVENTDVTVVEQLDTPSLVKEEAVSVVE
EAASLLSIVEETFLEEAEEILATTDSLLKQWTEQRSDRSVLLQLQRAAHSLKGGARMAENEPVGAIAYELETTFEQFAVH
NFSSNVYDPLLQTAFEWLKQAIFKRDFSNYDGLKNSLASIDYVDVIAQLPTRVTQIDLLNAVPSFEFVQGDGTEPPAMLG
EWKETTHLDGGNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHG
SENSRYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPR
LQRIVRQTASTLNRPTELVVHNTEGELDRTILERLVTPFEHMLRNAIDHGIEDAEQRSAAKKSATGQIELNISRQGTDVI
VSFKDDGKGIDESTIKAKALNLGLIKADQVLDKQEILQFIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALGGHVTVESE
IGFGTTFIIRVPTTVAVSDALMVKAGDQQYAIPLAQIDRIVRIAPTALDHYFHSKDDQFKIDGVSYKLRYLSEFLSNQPI
PRLSNIGHSLPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPVGQQFASIGAIAGATILGDGHVCLILDGQNIARQILSTK
RVTHAADHRDFGRHQDTRRLVMIVDDSVTVRKVTSRLLERQGFDIVTAKDGVDAMEQLESVKPDLMLLDIEMPRMDGFEV
TNLVRHHEIHQNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLLAEKQG

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=527954 I6I50_RS10690 WP_201706204.1 2228929..2233434(+) (chpA) [Acinetobacter johnsonii strain FDAARGOS_1093]
ATGAAAGAAATATTAAAACATTTAGTTGAAACGACAACGCTTCCGGAAGATAGTTATCTAGATCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGTTAGATCCATTATTTGAAAAGTGGTACGCTGAACCGACCC
ATCAAGAAACCTTATTGAGCATACGTCGTCACTTCCATACCTTAAAAGGCTCTGGCCGTATGGTGGGGGCAAAGTCAGCA
GGTGAAACAGCATGGGGGGTTGAAGATACCTTAAATCGTGTGATTTCAGGTGCTGTACCGCTTACGGCAACGGTTCAAAA
ATTTGCTAAGACGGTATTTAAACTGTATCAATTTAAACTGTATCCGACTTTTAAAGCGGTACAGGAAATTGATCTTGACC
TTCGTCCATTGGTTTTAATTGGACAACAATTACAACAAAATCAAAGTTTAGAACCTGCTCTAGAAGAGTTGCTACAACTG
TCTAATCATCTAAATAGTAATGATGTCGTGACGGGATTAGAGCTGAGCGATATTGAAGTGGCTGAATCTGAGCCACAAGT
TGCAGACGTTTCTGAGCAGGATGATCAAGTGCATGATGTCCTTGAAGAAACTTTAGCGATCTTCATTGAAGAAGCGGAAG
ACCATTTAGCGACTATCGATCAGTTCTTAAATGCAGATGAAACCAAGGTACAAGATTACAATGGTTTAATCCGTGCTTTA
CATACATTGCGCGGTAGTTCGTCTATGGCGCAAATTGAGCATGTCTTTAATGCCAGCTCAAAAGTCGAAAATCTATTTAA
AACCTTGGTACAAGAAGAGATCGTTTCTACCTCGAAGGAAATCTCTTTACTCACCCAATATGCTGAATTTGTACGTGACT
ATTTACATGTGCTTGGGCGTGGTACGAACGAACAGCTTGATGTAATTTATGCCACGTTTACTACGGCTTGGGATAACTAT
GGTTTCAGTATAGAAGACGTAGACGATGAACTGAACCCACAAGGTATGGTCTCGAAGCTGATCGAGTTAAATATTGATCT
GCTGCTTGATGCCGAGTTTGAGTTTGATCAGCGTGCTAAGGTTGAATATCCTGAATATATTCAGCACTTAGGTGAACAAG
CAAAACAATTGCTAGAATTCACCAATAACCGTGCTGCTCAAGGAATTCATGACTTTACTTCTGAGCTATATGCGGGTTAT
CAAGCCTTACTGGAAAAGCCAGAATTACTCAATGTAGATTATGCATACGAGTTATTTGGTCAGGCACATCAAGAATTTAT
CCATTTATTTGATACTTTAGCTGCGGGTCAGCGCGTCATTCTGACTGAAGAAGTGCATAAAGTTCTGAATGAATTAATGG
CTTTCGTACAGCAAGATGTTGAATCGACTTCGACGACGGTAACTGAACCTGTTGCTGAGGCTATTGTTTCTGGAAATACT
TTACAACCAAGCCTTGATCTTGCACAGATTTCGCAGCAAATTGCATCGGATCATCAGTACAAGCAATCGAATACGGCCAA
TACCGATTTTGATGATGATTTGCTTGATATCTTCTTGGAAGAAGCTGAAGAATTATTGATGGGGATGGATCAGGATCTTA
ATACTTGGTCTAAAAATGGCAATGATCCAGCAGCACTCAATAATTTAATGCGTTATTTGCACACCTTAAAAGGTGGTGCC
AATATGATTTCTGCACCTTTTATTGGTTCGATTGCACACGAATTAGAGTCTATTTATGAGCGTGTGATTCGTCAGCAAAT
TGCCACAACGCCACAGTTGATTAGTATCATTCGCTTAGTACAGGATGACGTCGCAGACCGAATTCAGGTCATTCGTACGG
AGAAGGTTGATTATCCTGCAACAGCGACCATCAATGTACTGCATAACATTCAGAACTTAGTTGAGGGTACGACTGTTACA
ACTTCGGCATCTGAGCCATTGGTTGAGGCGTTTGTTGCAGCAATTGAAGAGGCTCAGCCTCCAGTTCAAGAACCTTTATC
TAATGTAGATAGAATAATTGAAGTTGAAACAGAAACAGCTGCTGTTGAGTCGGCAACTGCGACTGAAGAGCCGAGTGTAG
TTGAGAACACGGACGTTACTGTCGTTGAACAGCTGGATACTCCGTCACTTGTCAAAGAAGAAGCAGTCAGCGTTGTTGAA
GAGGCAGCCAGCCTGTTATCAATTGTTGAAGAAACCTTCTTGGAAGAAGCTGAAGAAATTTTAGCGACTACGGATAGCTT
ACTGAAACAATGGACTGAACAACGTAGTGATCGTAGTGTGTTACTGCAATTGCAACGTGCCGCGCACAGTTTAAAAGGCG
GTGCACGTATGGCGGAGAATGAACCCGTTGGTGCGATTGCTTATGAATTAGAAACCACATTTGAGCAATTTGCTGTACAT
AATTTCAGTTCAAACGTGTATGACCCATTATTGCAAACCGCATTTGAATGGTTAAAACAAGCCATCTTCAAACGTGATTT
CAGTAATTATGATGGTCTGAAAAACAGCTTAGCATCTATTGATTATGTGGATGTGATTGCACAATTACCGACGCGTGTAA
CTCAAATTGATTTACTCAATGCGGTACCAAGTTTTGAGTTTGTGCAGGGTGATGGTACTGAGCCGCCAGCAATGTTGGGT
GAGTGGAAAGAAACGACTCACTTGGATGGTGGTAATGAGATGATCCGTATCTCAGCTGATTTGGTTGAAAAAATGATCGA
CCTATCAGGTGAAAATGCAATTAACCGTTCGCGTATCGAGATGGACTTAGGTCAACTCGGCAATACGTTGAACGAGATGG
AGCTTGCAATTAAGCGTTTGGCGGATCAGTTACGTCGAATGGAAGGAGAGCTTGAAAGTCAAATTATTGCGAAGCACGGT
TCTGAAAACTCGCGCTACGCAGACTTTGACCCCTTGGAGATGGACCAATATTCATCGCTGAATCAATTGTCTAAATCTTT
AGCCGAATCAGCTTCGGATTTGGTTGACTTCAAGAGCACTTTGGCTGAGAAAATTCGTGATGCGGAAGGCTTGTTATTAC
AACAATCTCGTATTCAAGCTGAAATTCAAGAAAGCTTAATGCGGACACGTTTGGTGCCGTTCTCACGTATGTTGCCACGT
TTGCAGCGTATTGTACGTCAGACCGCATCAACCTTGAACCGTCCAACGGAATTGGTCGTCCATAACACCGAAGGTGAATT
AGATCGTACGATTCTTGAACGTTTGGTTACGCCGTTTGAGCATATGCTACGTAACGCAATCGACCACGGTATTGAAGATG
CGGAACAACGTAGTGCTGCGAAAAAATCAGCGACAGGCCAAATTGAACTAAACATTAGCCGTCAAGGTACAGATGTTATC
GTCAGCTTTAAAGATGATGGTAAAGGTATTGATGAAAGCACGATTAAAGCGAAAGCGCTAAACTTAGGTTTAATTAAAGC
CGATCAAGTGCTAGATAAACAGGAAATCTTACAATTTATTTTCCATCCGGGTTTCAGTACAGCCAAAGAAGTGACGCAAA
TTTCTGGACGTGGTGTCGGTCTTGATGTGGTGCAAAGTGAAATTAAAGCACTGGGTGGACATGTCACGGTTGAATCGGAA
ATTGGATTCGGCACGACCTTCATTATTCGCGTACCGACTACGGTAGCGGTGAGTGATGCCTTGATGGTGAAAGCAGGCGA
TCAACAATATGCGATTCCATTGGCGCAGATTGATCGTATTGTGCGTATTGCACCAACAGCATTGGATCACTATTTCCACA
GCAAAGATGACCAATTCAAAATTGATGGTGTGAGTTATAAACTGCGCTATTTATCTGAGTTTTTATCTAATCAGCCGATT
CCGCGTTTGAGTAATATTGGACATTCATTGCCGGTGTTGTTGATTAAAGGCAACAGTGGACAAACCATTGCATTATTGGT
TGATCAGCTCATTGGTTCACGTGCGCAAATTGTAGTGAAGCCGGTTGGACAACAGTTTGCCAGCATTGGTGCAATTGCGG
GTGCAACGATTTTGGGTGATGGCCATGTGTGTTTGATTTTAGATGGTCAGAACATTGCACGTCAGATTTTAAGTACCAAG
CGTGTGACGCATGCAGCTGATCACCGTGACTTTGGTCGCCATCAAGATACACGTCGTTTAGTGATGATTGTGGATGACTC
AGTTACGGTACGTAAGGTCACATCGCGCTTATTAGAGCGTCAAGGCTTTGATATTGTAACTGCAAAAGACGGTGTCGATG
CGATGGAGCAGCTAGAGAGCGTTAAACCGGACTTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGTTTCGAAGTG
ACGAACTTGGTTCGGCACCACGAAATTCACCAGAACTTGCCGATTATTATGATTACATCGCGTACGGGTGAAAAACACCG
TGAACGTGCTTTCAGCTTGGGCGTGACACACTACATGGGCAAACCATTCCAAGAGGCAGAATTACTTGCCAACATTCAGC
AATTATTGGCTGAAAAGCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.907

100

0.618