Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   I6I51_RS09380 Genome accession   NZ_CP068187
Coordinates   1794976..1795833 (-) Length   285 a.a.
NCBI ID   WP_004691238.1    Uniprot ID   A0AAW6JCY5
Organism   Acinetobacter johnsonii strain FDAARGOS_1094     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1789976..1800833
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I51_RS09355 (I6I51_09360) miaB 1790492..1791949 (+) 1458 WP_078426188.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  I6I51_RS09360 (I6I51_09365) - 1791988..1793064 (+) 1077 WP_201701648.1 PhoH family protein -
  I6I51_RS09365 (I6I51_09370) ybeY 1793122..1793601 (+) 480 WP_004691232.1 rRNA maturation RNase YbeY -
  I6I51_RS09370 (I6I51_09375) - 1793703..1794083 (+) 381 WP_201704290.1 hypothetical protein -
  I6I51_RS09380 (I6I51_09385) tonB2 1794976..1795833 (-) 858 WP_004691238.1 energy transducer TonB Machinery gene
  I6I51_RS09385 (I6I51_09390) - 1796095..1796772 (+) 678 WP_004977854.1 hypothetical protein -
  I6I51_RS09390 (I6I51_09395) - 1796928..1797638 (+) 711 WP_201701650.1 DUF3108 domain-containing protein -
  I6I51_RS09395 (I6I51_09400) - 1797729..1798304 (+) 576 WP_004691243.1 xanthine phosphoribosyltransferase -
  I6I51_RS09400 (I6I51_09405) - 1798642..1799634 (+) 993 WP_227556768.1 sensor domain-containing diguanylate cyclase -
  I6I51_RS09405 (I6I51_09410) - 1799847..1800212 (+) 366 WP_201701651.1 hypothetical protein -

Sequence

Protein


Download         Length: 285 a.a.        Molecular weight: 32599.13 Da        Isoelectric Point: 6.6632

>NTDB_id=527894 I6I51_RS09380 WP_004691238.1 1794976..1795833(-) (tonB2) [Acinetobacter johnsonii strain FDAARGOS_1094]
MPLAHDWWKDPIFTATVVLAVFLHLVILTLQFAMPQENDAAVKEIAVTLRPSDKKIENADFLAQADQQGSGTFRESHRMS
SDMPAPMLEQSTGEQQRETLEQIQQKRELNFEEKLLMTTLSWQKQAEDNQRKKAMEEMNSQFQAKAAMVASLEAQYLQRQ
QNFSRQQKIKTVDGIQAKQDISAAYLEKFRQKVEFYGNRYYPEAAKQQRLAGEVRLMVILNASGGIRAIRLIDSSGHEML
DEAAKASVRKAAPFGGFDAKMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 858 bp        

>NTDB_id=527894 I6I51_RS09380 WP_004691238.1 1794976..1795833(-) (tonB2) [Acinetobacter johnsonii strain FDAARGOS_1094]
ATGCCTTTGGCTCATGATTGGTGGAAAGACCCAATTTTTACAGCGACCGTCGTGCTGGCGGTATTTTTGCATCTCGTGAT
TTTGACTTTGCAATTTGCGATGCCTCAAGAAAATGATGCGGCAGTGAAAGAAATTGCCGTGACTTTGCGTCCTTCAGATA
AAAAAATTGAAAATGCAGATTTTTTAGCGCAAGCCGATCAACAGGGTTCAGGGACTTTTCGTGAGTCACATCGCATGTCG
AGTGACATGCCCGCACCAATGCTTGAGCAAAGTACAGGCGAACAGCAGCGTGAAACTTTAGAACAGATCCAACAAAAACG
TGAGCTGAATTTTGAAGAAAAACTGTTAATGACGACTTTAAGTTGGCAAAAACAAGCTGAGGATAACCAGCGCAAAAAAG
CCATGGAAGAAATGAACAGTCAGTTTCAAGCTAAAGCAGCAATGGTGGCCAGCCTTGAAGCACAATATTTACAACGCCAA
CAAAACTTTAGCCGTCAGCAAAAAATCAAAACAGTCGATGGTATTCAAGCCAAGCAAGATATTTCGGCCGCCTATCTTGA
AAAGTTCCGTCAGAAAGTGGAGTTTTATGGCAACCGTTACTACCCAGAAGCAGCTAAACAGCAGCGTCTGGCGGGTGAAG
TGCGTTTAATGGTGATTCTAAATGCATCAGGAGGTATCCGTGCCATTCGCCTGATTGATAGTTCAGGCCATGAGATGCTC
GATGAGGCTGCAAAAGCGTCGGTGCGTAAAGCCGCACCATTTGGTGGATTTGATGCCAAAATGAAGGATATTTCTGAGTT
ACGCATTGTGCGTACATGGCGTTTTGACCCAGCAGAGGCAGAGTTTGAAGTGCACTGA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(198-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

74.286

98.246

0.73