Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   I6I52_RS15475 Genome accession   NZ_CP068180
Coordinates   3313558..3315126 (+) Length   522 a.a.
NCBI ID   WP_010588809.1    Uniprot ID   A0A3F3L610
Organism   Acinetobacter ursingii strain FDAARGOS_1095     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3308558..3320126
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I52_RS15455 (I6I52_15455) - 3309022..3310323 (+) 1302 WP_010588808.1 homoserine dehydrogenase -
  I6I52_RS15460 (I6I52_15460) thrC 3310384..3311523 (+) 1140 WP_005001803.1 threonine synthase -
  I6I52_RS15465 (I6I52_15465) pbpG 3311625..3312686 (-) 1062 WP_080633167.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  I6I52_RS15470 (I6I52_15470) - 3312901..3313536 (+) 636 WP_004995355.1 response regulator -
  I6I52_RS15475 (I6I52_15475) pilS 3313558..3315126 (+) 1569 WP_010588809.1 ATP-binding protein Regulator
  I6I52_RS15480 (I6I52_15480) pilR 3315146..3316576 (+) 1431 WP_026039946.1 sigma-54 dependent transcriptional regulator Regulator
  I6I52_RS15485 (I6I52_15485) - 3316594..3317772 (-) 1179 WP_004995358.1 S41 family peptidase -
  I6I52_RS15490 (I6I52_15490) gpmI 3317787..3319337 (-) 1551 WP_010588812.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 59646.41 Da        Isoelectric Point: 6.1856

>NTDB_id=527872 I6I52_RS15475 WP_010588809.1 3313558..3315126(+) (pilS) [Acinetobacter ursingii strain FDAARGOS_1095]
MQAQSSTPLSYTIYRLGLWYTLYRLLIVTGLIIIFQLISEQLNADYNQPVLYFYTLIAYCVASLIQFLLFKFYPRQIDRQ
LIIVFVVDVIALGLLTFSLGAPNLNISLLYVITVFSAAILLPRKVSLVITLLAVISLIYQQFFSSFFDYNNLSTIGNSAL
LAFLFFVMYGIGQVAVKHFKILENISFRQSQALYQLQNINRYILEQIDDGYLVLDENYHVVLSNPAACTLLGIPPLFAHE
QLPLAKTQPDLFELLRFDPLEDGEQFIFESQLSTYNVHIKVQRLIVPHQALILLRLQDVQQLNQQVQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELYIGSESEQQHLLQKMISKQSKRINDIIEDTLRMARNDTTHPMLIELDSFLSHLLTEDLSDVQ
HQIRLEMTEKVIVQFDPKQLTQVLINLIRNALRHNDPDVDQIVLSVRMVQAEVFIDVIDFGNGIEKRDISQLFKPFFSTE
IKGTGLGLYLSHSLCEANHAKLSYVEQQKGACFRIQCSTKDK

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=527872 I6I52_RS15475 WP_010588809.1 3313558..3315126(+) (pilS) [Acinetobacter ursingii strain FDAARGOS_1095]
ATGCAGGCGCAATCTTCTACGCCACTTTCTTATACGATTTACCGTTTAGGTTTGTGGTACACCCTTTACCGCCTGCTTAT
TGTCACAGGTTTAATCATTATTTTTCAGCTCATTTCTGAGCAGTTAAATGCCGACTATAATCAACCTGTATTGTATTTTT
ATACGCTTATCGCTTATTGCGTAGCCAGTCTGATTCAGTTTTTATTGTTTAAGTTTTATCCACGACAGATTGATCGTCAA
CTGATTATAGTGTTTGTGGTTGATGTCATTGCATTGGGATTGCTGACATTTTCTCTGGGCGCACCAAATTTAAATATTAG
TTTGCTGTATGTTATTACGGTGTTTTCTGCCGCGATTTTACTGCCCAGAAAAGTCTCTTTGGTGATCACGCTTCTTGCTG
TTATTTCACTGATCTATCAACAGTTTTTTTCAAGTTTTTTTGATTATAATAATTTAAGCACCATTGGAAATAGTGCTTTA
CTGGCTTTTTTGTTTTTTGTCATGTATGGCATTGGTCAAGTTGCTGTAAAACATTTTAAAATTCTGGAAAATATTAGCTT
TCGTCAATCCCAAGCGCTATATCAACTTCAAAATATTAATCGTTATATTTTAGAACAAATTGATGATGGCTATCTGGTAT
TAGATGAAAACTACCATGTGGTGCTCAGCAATCCAGCCGCCTGTACGCTGTTGGGCATTCCGCCATTATTTGCGCATGAA
CAACTTCCGTTGGCCAAAACCCAGCCCGATTTATTTGAGCTTTTAAGATTTGATCCCTTAGAAGACGGCGAACAATTTAT
TTTTGAATCACAACTGTCTACTTATAACGTGCATATCAAGGTACAACGCTTGATCGTGCCACATCAGGCTTTAATTTTAT
TGCGCTTGCAGGATGTGCAGCAGCTCAATCAACAGGTTCAACAGCTTAAACTTGCCGCTTTAGGACAACTTTCCGCCAGT
ATTGCCCACGAAATTCGTAACCCATTGGCAGCGATTGTACAGGCCAATGAACTGTATATTGGCAGCGAATCTGAACAGCA
ACATTTACTGCAAAAAATGATCAGTAAACAATCAAAACGTATCAATGATATTATTGAAGATACATTGCGTATGGCGCGCA
ATGACACCACGCATCCGATGCTGATTGAGTTAGATAGCTTTTTGTCTCATTTACTGACTGAAGATTTATCCGATGTTCAA
CATCAAATCCGCTTGGAGATGACCGAGAAGGTAATCGTTCAATTTGATCCAAAACAGTTAACCCAAGTTTTAATCAACCT
GATTCGCAATGCATTACGCCATAATGATCCAGATGTTGATCAGATTGTATTATCCGTACGTATGGTTCAAGCTGAAGTAT
TCATTGATGTGATTGATTTTGGCAATGGCATCGAAAAACGTGATATATCGCAACTATTTAAGCCATTTTTTAGTACCGAA
ATCAAGGGAACTGGTTTAGGATTATATTTGTCCCATAGTCTGTGTGAAGCCAATCACGCCAAGCTCAGTTATGTGGAACA
ACAAAAAGGAGCATGTTTTAGAATTCAATGCTCAACAAAAGATAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-516)

His Kinase A (phospho-acceptor) domain (HisKA)

(313-376)

PAS domain (PAS_8)

(201-250)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3F3L610

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

63.514

99.234

0.63