Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   I6I52_RS14390 Genome accession   NZ_CP068180
Coordinates   3110475..3111356 (-) Length   293 a.a.
NCBI ID   WP_004985439.1    Uniprot ID   A0AA46PCG1
Organism   Acinetobacter ursingii strain FDAARGOS_1095     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3105475..3116356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I52_RS14375 (I6I52_14375) miaB 3107318..3108769 (+) 1452 WP_004985452.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  I6I52_RS14380 (I6I52_14380) - 3108810..3109892 (+) 1083 WP_004985450.1 PhoH family protein -
  I6I52_RS14385 (I6I52_14385) ybeY 3109971..3110450 (+) 480 WP_004985442.1 rRNA maturation RNase YbeY -
  I6I52_RS14390 (I6I52_14390) tonB2 3110475..3111356 (-) 882 WP_004985439.1 energy transducer TonB Machinery gene
  I6I52_RS14395 (I6I52_14395) - 3111595..3112290 (+) 696 WP_004985437.1 hypothetical protein -
  I6I52_RS14400 (I6I52_14400) - 3112446..3113162 (+) 717 WP_004985435.1 DUF3108 domain-containing protein -
  I6I52_RS14405 (I6I52_14405) - 3113249..3113824 (+) 576 WP_004985432.1 xanthine phosphoribosyltransferase -
  I6I52_RS14410 (I6I52_14410) - 3114019..3114393 (+) 375 WP_004985429.1 hypothetical protein -
  I6I52_RS14415 (I6I52_14415) wrbA 3114572..3115162 (-) 591 WP_004985428.1 NAD(P)H:quinone oxidoreductase -

Sequence

Protein


Download         Length: 293 a.a.        Molecular weight: 33261.89 Da        Isoelectric Point: 9.6666

>NTDB_id=527866 I6I52_RS14390 WP_004985439.1 3110475..3111356(-) (tonB2) [Acinetobacter ursingii strain FDAARGOS_1095]
MFKKNVGYFPVIRHWWQDSILLAAIAIAIVLHIFVLLIHFAMPAPSDTATKEIAVSIRPSTDQVEHADFLAQANQKGSGK
FHDSHRMSSDMPKAMPDQSSGESPTQTLDHIQQQRELKFEEKVLMTVLSWQKQAEENQRKKAQDDLQSQFQAKAAMVASI
EAQYLQRQQNFSRQQRIKTVDGIQAKQDASAAYLNKFREKVELYGNRYYPDEAKQQNLAGEVRLMVVLNAQGGIRAIRLI
ESSGHPILDEAAKASVRRGAPFGRFDAGMKDISELRIIRTWKFNPAQAEFEVH

Nucleotide


Download         Length: 882 bp        

>NTDB_id=527866 I6I52_RS14390 WP_004985439.1 3110475..3111356(-) (tonB2) [Acinetobacter ursingii strain FDAARGOS_1095]
ATGTTTAAAAAAAATGTAGGTTATTTTCCAGTTATTCGACACTGGTGGCAGGATTCTATTTTATTGGCTGCAATTGCGAT
TGCAATCGTGCTGCATATTTTCGTTTTGCTGATTCATTTCGCCATGCCTGCGCCATCGGATACTGCGACCAAAGAAATTG
CAGTATCGATTCGTCCAAGTACTGATCAGGTTGAGCATGCCGACTTTTTAGCACAGGCAAATCAAAAAGGATCTGGAAAA
TTTCATGATTCTCACCGTATGTCGAGTGATATGCCCAAAGCCATGCCTGATCAAAGCTCAGGTGAGTCACCAACACAAAC
CCTTGACCATATTCAGCAACAACGTGAGCTAAAATTTGAAGAAAAAGTGCTGATGACGGTATTAAGCTGGCAAAAACAAG
CGGAAGAAAACCAGCGAAAAAAAGCACAGGATGATTTACAAAGCCAGTTTCAAGCTAAAGCAGCCATGGTCGCGAGCATT
GAGGCGCAATATTTACAGCGTCAGCAGAATTTTAGCCGACAGCAACGGATTAAAACCGTAGATGGTATTCAAGCCAAGCA
AGATGCATCAGCAGCCTATTTAAATAAATTTCGTGAAAAAGTGGAACTTTATGGCAACCGTTATTATCCAGATGAAGCCA
AACAACAAAATTTAGCAGGTGAAGTTCGACTCATGGTGGTGCTGAATGCACAAGGCGGCATTCGTGCGATTCGTTTAATC
GAGAGTTCTGGACATCCAATACTGGATGAGGCTGCCAAAGCATCGGTACGCCGTGGCGCACCGTTTGGTCGTTTTGATGC
AGGAATGAAAGATATTTCCGAATTACGGATTATCCGAACATGGAAATTTAACCCAGCACAGGCTGAGTTTGAAGTGCATT
AG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(206-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

77.551

100

0.778