Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   I6I53_RS07270 Genome accession   NZ_CP068176
Coordinates   1404860..1405741 (+) Length   293 a.a.
NCBI ID   WP_004995056.1    Uniprot ID   A0A7T9UKL9
Organism   Acinetobacter ursingii strain FDAARGOS_1096     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1399860..1410741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I53_RS07245 (I6I53_07250) wrbA 1401047..1401637 (+) 591 WP_004995064.1 NAD(P)H:quinone oxidoreductase -
  I6I53_RS07250 (I6I53_07255) - 1401823..1402197 (-) 375 WP_004995062.1 hypothetical protein -
  I6I53_RS07255 (I6I53_07260) - 1402392..1402967 (-) 576 WP_004985432.1 xanthine phosphoribosyltransferase -
  I6I53_RS07260 (I6I53_07265) - 1403054..1403770 (-) 717 WP_004985435.1 DUF3108 domain-containing protein -
  I6I53_RS07265 (I6I53_07270) - 1403926..1404621 (-) 696 WP_004995058.1 hypothetical protein -
  I6I53_RS07270 (I6I53_07275) tonB2 1404860..1405741 (+) 882 WP_004995056.1 energy transducer TonB Machinery gene
  I6I53_RS07275 (I6I53_07280) ybeY 1405766..1406245 (-) 480 WP_004995054.1 rRNA maturation RNase YbeY -
  I6I53_RS07280 (I6I53_07285) - 1406324..1407406 (-) 1083 WP_004985450.1 PhoH family protein -
  I6I53_RS07285 (I6I53_07290) miaB 1407447..1408898 (-) 1452 WP_004995052.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 293 a.a.        Molecular weight: 33223.79 Da        Isoelectric Point: 9.6666

>NTDB_id=527828 I6I53_RS07270 WP_004995056.1 1404860..1405741(+) (tonB2) [Acinetobacter ursingii strain FDAARGOS_1096]
MFKKNVGYFPVIRHWWQDSTLLAAIAIAIVLHIFVLLIHFVMPAPSDTATKEIAVSIRPSTDQVEHADFLAQANQKGSGK
FHDSHRMSSDMPKAMPDQSSGESATQTLDHIQQQRELKFEEKVLMTVLSWQKQAEENQRKKAQDDLQSQFQAKAAMAASI
EAQYLQRQQNFSRQQRIKTVDGIQAKQDASAAYLNKFREKVELYGNRYYPDEAKQQNLAGEVRLMVVLNAQGGIRAIRLI
ESSGHPILDEAAKASVRRGAPFGRFDAGMKDISELRIIRTWKFNPAQAEFEVH

Nucleotide


Download         Length: 882 bp        

>NTDB_id=527828 I6I53_RS07270 WP_004995056.1 1404860..1405741(+) (tonB2) [Acinetobacter ursingii strain FDAARGOS_1096]
ATGTTTAAAAAAAATGTAGGTTATTTTCCAGTGATTCGACACTGGTGGCAGGATTCTACTTTATTGGCTGCAATTGCGAT
TGCAATCGTGCTGCATATTTTCGTTTTGCTGATTCATTTCGTCATGCCTGCGCCTTCTGATACTGCGACCAAAGAAATTG
CGGTATCGATCCGTCCAAGTACTGATCAGGTTGAGCATGCCGACTTTTTAGCACAAGCAAATCAAAAAGGATCTGGAAAA
TTTCATGATTCTCACCGTATGTCGAGTGATATGCCTAAAGCCATGCCTGATCAAAGCTCAGGCGAATCTGCAACACAAAC
CTTAGACCATATTCAGCAACAACGTGAACTTAAATTTGAAGAAAAAGTGCTGATGACGGTATTAAGCTGGCAAAAACAGG
CCGAAGAAAACCAGCGAAAAAAAGCACAGGATGATTTACAAAGCCAGTTTCAAGCTAAAGCCGCCATGGCTGCGAGCATT
GAGGCGCAATATTTACAGCGTCAGCAGAATTTTAGCCGACAGCAACGGATTAAAACCGTAGATGGTATTCAAGCCAAGCA
AGATGCATCAGCAGCCTATTTAAATAAGTTCCGCGAAAAAGTAGAGTTGTATGGCAATCGTTATTATCCAGATGAAGCCA
AACAACAAAATTTAGCAGGCGAAGTTCGACTCATGGTGGTGCTGAATGCACAAGGTGGGATTCGTGCCATTCGTTTAATT
GAAAGTTCTGGACACCCAATACTGGATGAGGCTGCTAAAGCCTCGGTTCGCCGTGGCGCACCGTTTGGTCGTTTTGATGC
AGGAATGAAGGATATTTCCGAATTACGGATTATCCGAACATGGAAATTTAACCCAGCACAGGCTGAGTTTGAAGTGCATT
AG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(206-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T9UKL9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.871

100

0.771