Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   I6I53_RS03190 Genome accession   NZ_CP068176
Coordinates   549897..552125 (+) Length   742 a.a.
NCBI ID   WP_004994183.1    Uniprot ID   A0A7T9UJA6
Organism   Acinetobacter ursingii strain FDAARGOS_1096     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 544897..557125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I53_RS03165 (I6I53_03170) - 546200..546538 (-) 339 WP_004994172.1 tRNA-binding protein -
  I6I53_RS03170 (I6I53_03175) - 546641..547294 (-) 654 WP_035253966.1 IS1595 family transposase -
  I6I53_RS03175 (I6I53_03180) - 547389..547727 (-) 339 WP_004994178.1 hypothetical protein -
  I6I53_RS03180 (I6I53_03185) gspG 548059..548511 (-) 453 WP_005001245.1 type II secretion system major pseudopilin GspG -
  I6I53_RS03185 (I6I53_03190) gspF 548535..549740 (-) 1206 WP_004991557.1 type II secretion system inner membrane protein GspF -
  I6I53_RS03190 (I6I53_03195) priA 549897..552125 (+) 2229 WP_004994183.1 primosomal protein N' Machinery gene
  I6I53_RS03195 (I6I53_03200) - 552214..554067 (+) 1854 WP_004994185.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  I6I53_RS03200 (I6I53_03205) - 554118..554993 (+) 876 WP_004991565.1 Hsp33 family molecular chaperone HslO -
  I6I53_RS03205 (I6I53_03210) - 555164..556108 (+) 945 WP_004994187.1 DnaJ C-terminal domain-containing protein -
  I6I53_RS03210 (I6I53_03215) - 556120..556449 (+) 330 WP_004991571.1 chaperone modulator CbpM -
  I6I53_RS03215 (I6I53_03220) - 556543..557085 (+) 543 WP_004994188.1 ClbS/DfsB family four-helix bundle protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84704.98 Da        Isoelectric Point: 8.5579

>NTDB_id=527806 I6I53_RS03190 WP_004994183.1 549897..552125(+) (priA) [Acinetobacter ursingii strain FDAARGOS_1096]
MPNTPPPQTEIYRIRVAVPVYLYETFDYSLTHAQYQQAQVGARVAIPFGRQKLIGIITEKIAPDVPLDSRFQLKAIFELL
DDDAILDDKVLTLLTWSAQYYQFPIGEVMQAALPALLRQGKPLDILAHIWKIKPCEDAESKLKRSQKQFEAYQILKLHPT
GTTENILNLSGVETATLRALAKKDLVECHLETQDFRPTPVQLAQMPLTPNDDQKKAIQHVVQSLHHYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFHCDVALMHSGLNDSKRLQAWQQAKMGKASIILGTRSAIYTP
LHNLGLIILDEEHDISYKQQEGFRYHARDVALYRGHLENCPVILGSATPSIDSYHLVEQEKLKLLQLNQRAGVALMPKMH
VIDLKVAKKKQGLSQQLIEQIQKKLDKKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYTYLHCHHCSTI
QRLPDQCPECQHQSLKTLGMGTGKVEEHLNELFPDHDVIRVDRDSTSRVGSWQKIYDRIQQNQPMILLGTQMLAKGHHFP
FVTLVAILDIDAGLLSVDVRAPERTAQLIVQVSGRAGRGEHKGDVYLQTLRPDHPMLTTLIEKDYRAVAKHMLYERKAAL
LPPYRYAVLIRSDSKNRDYSQQFLADIAAQLQLMAQDSIEIWGPIPAPMERKAGRYRAHMVILSQDRARMHFFLRQWWAQ
VVHLPKQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=527806 I6I53_RS03190 WP_004994183.1 549897..552125(+) (priA) [Acinetobacter ursingii strain FDAARGOS_1096]
ATGCCAAACACGCCGCCACCTCAAACAGAGATTTATCGTATTCGGGTCGCTGTACCTGTCTATCTGTATGAGACCTTTGA
TTACAGCTTAACTCATGCTCAATATCAACAGGCTCAGGTTGGCGCGCGAGTGGCAATTCCTTTCGGTCGGCAAAAACTGA
TTGGCATCATTACCGAGAAAATCGCGCCAGATGTTCCACTGGATTCACGGTTTCAGCTCAAAGCTATTTTTGAGTTGCTT
GATGATGATGCCATTTTAGATGACAAAGTTTTAACTTTGTTGACATGGTCAGCGCAGTATTATCAGTTTCCGATTGGGGA
GGTGATGCAAGCAGCTTTACCTGCACTGTTACGACAAGGCAAACCATTGGATATTTTGGCACATATCTGGAAAATCAAAC
CTTGTGAAGATGCAGAATCCAAACTTAAACGCTCGCAAAAGCAATTTGAAGCCTATCAAATTTTAAAGCTACACCCGACA
GGAACGACCGAAAACATTTTAAATTTAAGTGGGGTAGAAACTGCGACTTTACGTGCTTTGGCAAAAAAGGATCTGGTCGA
ATGTCATTTAGAAACACAAGATTTTCGACCGACACCCGTTCAATTGGCACAAATGCCCCTCACGCCCAACGATGATCAGA
AAAAAGCCATTCAACACGTGGTTCAGTCGCTCCATCATTATCAAGCTTTTTTATTGGACGGCTTAACAGGTAGTGGCAAA
ACCGAAGTCTATCTACACATCATGCATGAGGTGTTGAAACAAGGGAAGCAAGTGCTGGTTTTAGTGCCTGAGATCGGACT
GACCCCACAAACCATTTCCCGATTTAAATCGCGTTTTCATTGTGATGTTGCGCTGATGCATTCGGGCTTAAACGACTCCA
AACGTCTGCAAGCATGGCAACAGGCCAAAATGGGCAAAGCTTCAATCATTTTAGGCACACGCTCTGCTATTTATACGCCT
TTGCATAATCTTGGTTTAATCATTCTGGATGAAGAACATGATATTTCCTATAAACAACAGGAAGGCTTTCGTTATCATGC
ACGGGATGTGGCGCTGTATCGAGGGCATTTAGAAAACTGCCCTGTTATTTTAGGCTCAGCCACACCAAGTATTGATAGTT
ACCATCTGGTCGAACAGGAAAAATTAAAACTACTACAACTCAATCAACGTGCGGGTGTGGCACTTATGCCGAAAATGCAT
GTGATTGATTTAAAGGTTGCCAAGAAAAAGCAAGGGTTGAGTCAACAACTGATTGAGCAAATCCAAAAAAAACTGGATAA
AAAAGAACAAGTGCTCATTTTCCTGAATCGCCGAGGTTATGCACCTGTTTTGGTTTGCGAAAGCTGTGGCTGGCAAGCCA
ATTGTCCACATTGTGATGCGCATTTTACGCTGCATACTCAACCTTACACTTATCTGCATTGTCACCATTGCAGTACGATT
CAGCGCTTACCCGATCAATGTCCAGAGTGTCAGCATCAGAGCCTAAAGACTCTCGGAATGGGAACAGGTAAAGTTGAAGA
ACATTTGAATGAACTTTTTCCAGACCATGATGTGATTCGGGTCGACCGAGATAGCACCAGTCGAGTCGGAAGCTGGCAGA
AAATTTATGATCGGATTCAGCAAAATCAACCCATGATCTTGCTAGGTACACAAATGCTCGCCAAAGGTCATCATTTTCCT
TTTGTCACCTTGGTTGCGATTTTAGATATTGATGCAGGTTTACTGTCTGTCGATGTCCGTGCACCTGAACGTACTGCACA
GTTGATTGTACAAGTGTCTGGTCGTGCTGGACGTGGGGAACATAAAGGTGACGTTTATTTACAGACGTTGAGACCTGATC
ATCCCATGCTCACCACGCTGATCGAAAAAGATTATCGTGCTGTCGCCAAACATATGCTCTATGAGCGGAAAGCTGCATTG
TTGCCTCCTTATCGTTATGCGGTATTGATTCGTTCAGATTCTAAAAACCGTGACTATAGTCAGCAATTCTTAGCCGACAT
CGCTGCCCAATTACAGTTAATGGCGCAGGATAGCATTGAGATTTGGGGGCCTATTCCCGCGCCGATGGAACGCAAAGCTG
GACGCTATCGGGCGCATATGGTGATCTTGTCGCAAGATCGCGCACGTATGCACTTCTTTTTACGGCAATGGTGGGCGCAA
GTGGTACATTTACCTAAACAGCATCAATTACGTTTATCGATTGATGTTGATCCACAGGAATTTAACTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

80.997

100

0.81