Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   K7B13_RS15645 Genome accession   NZ_CP082278
Coordinates   3032661..3034070 (-) Length   469 a.a.
NCBI ID   WP_262388215.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain 35M     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3027661..3039070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7B13_RS15620 (K7B13_15620) - 3027828..3029240 (-) 1413 WP_212098266.1 AAA family ATPase -
  K7B13_RS15625 (K7B13_15625) - 3029676..3029879 (-) 204 WP_212098268.1 hypothetical protein -
  K7B13_RS15630 (K7B13_15630) - 3029931..3030143 (-) 213 WP_212098270.1 helix-turn-helix transcriptional regulator -
  K7B13_RS15635 (K7B13_15635) - 3030293..3030688 (+) 396 WP_212098272.1 helix-turn-helix domain-containing protein -
  K7B13_RS15640 (K7B13_15640) - 3030800..3032623 (+) 1824 WP_212098274.1 recombinase family protein -
  K7B13_RS15645 (K7B13_15645) comP 3032661..3034070 (-) 1410 WP_262388215.1 hypothetical protein Regulator
  K7B13_RS15650 (K7B13_15650) comX 3034204..3034374 (-) 171 WP_212099082.1 competence pheromone ComX -
  K7B13_RS15655 (K7B13_15655) comQ 3034389..3035297 (-) 909 WP_249199260.1 polyprenyl synthetase family protein Regulator
  K7B13_RS15660 (K7B13_15660) degQ 3035428..3035568 (-) 141 WP_013353398.1 degradation enzyme regulation protein DegQ Regulator
  K7B13_RS15665 (K7B13_15665) - 3036033..3036374 (+) 342 WP_115997039.1 hypothetical protein -
  K7B13_RS15670 (K7B13_15670) - 3036380..3037602 (-) 1223 Protein_3054 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 469 a.a.        Molecular weight: 54879.39 Da        Isoelectric Point: 9.2298

>NTDB_id=527775 K7B13_RS15645 WP_262388215.1 3032661..3034070(-) (comP) [Bacillus amyloliquefaciens strain 35M]
MKTSNQELKVVDMTRSSFGRFVGLEIGDKIVEIDGEKPREENKYGPYLAKIKQLKVVRDGHLVELKNFEFIYLDSPYSFF
TYIVPCIFFMLSLICVFYIFKVNLKKDTISAYILICFLLCVSLAYLSAGGVTRGYPINRYLNLLSFLAVPVLYLNFLYQY
FKELKVKFSKGIFILILYTLPLINIICELFEKYINYNVITNLNLLTFLFEMMVVYVCLIMYQIKHRKKDFSYLLKVLLVS
NTIAFLPFTLLYIVPLVLFGQYVYSAVVTAPFLLLIPLALVYQFVVNKIYNIDFLLGRLRYYCLLAVIPTTGIVWVFVAF
INNKDENFNTFQITLFVFLIMLAVFYFKEVLDYKFRLKRFSEKYNYQDSVFKYTQLIKSVSVLNQVFIHLKATILDVLPV
SKAYIFEISSDGEIVYFDKQSTEPNWYPYKDKFEKVTSEIGKIIEINQGFLMKIGERGTSSYVLLCLSK

Nucleotide


Download         Length: 1410 bp        

>NTDB_id=527775 K7B13_RS15645 WP_262388215.1 3032661..3034070(-) (comP) [Bacillus amyloliquefaciens strain 35M]
GTGAAAACTTCCAACCAAGAATTGAAGGTCGTAGATATGACTAGGTCTTCATTTGGAAGATTCGTAGGATTGGAAATTGG
AGATAAAATTGTTGAAATAGATGGGGAAAAACCTAGAGAAGAAAATAAATATGGACCATATTTGGCAAAAATTAAACAAT
TGAAAGTAGTAAGAGACGGTCATTTAGTTGAACTTAAAAATTTTGAATTCATTTATTTAGACAGTCCATACAGCTTCTTT
ACCTACATTGTGCCATGTATCTTTTTTATGCTCAGCTTAATATGTGTTTTTTACATTTTTAAGGTTAACTTAAAGAAAGA
TACCATATCCGCTTATATACTTATCTGTTTTTTGTTGTGTGTATCCCTTGCATATTTAAGTGCAGGGGGAGTAACAAGAG
GTTATCCTATAAATAGGTACCTCAATCTCTTATCTTTTTTAGCAGTGCCTGTTTTATATCTTAATTTTTTGTATCAATAT
TTTAAAGAACTTAAAGTGAAATTTTCTAAAGGTATTTTCATTCTAATATTATATACGCTTCCTTTAATAAACATCATTTG
TGAACTATTTGAAAAATATATAAATTATAATGTAATCACAAACCTAAACCTTTTAACTTTTTTATTTGAAATGATGGTAG
TGTATGTATGTCTTATAATGTATCAAATAAAACACAGAAAAAAAGACTTCTCTTATTTATTAAAAGTATTATTGGTGTCT
AATACCATTGCTTTCTTACCTTTTACTTTATTATATATTGTTCCGTTGGTCTTGTTTGGACAATATGTATATAGTGCTGT
GGTTACCGCGCCTTTTCTTCTGCTTATACCTTTAGCATTGGTATATCAATTTGTTGTCAATAAGATTTATAACATTGATT
TCTTATTAGGCCGGCTTCGGTACTATTGTTTATTAGCTGTAATTCCGACTACAGGAATTGTGTGGGTTTTTGTTGCATTT
ATTAACAACAAAGATGAAAATTTTAACACTTTTCAAATCACACTATTTGTATTTTTAATTATGCTTGCAGTTTTTTACTT
TAAAGAAGTCCTAGACTATAAGTTTCGTTTGAAACGCTTTTCAGAAAAATATAATTACCAAGACAGCGTATTTAAATACA
CACAACTGATCAAAAGTGTGTCAGTTTTAAACCAAGTATTTATACATCTCAAAGCTACGATCTTAGATGTTTTGCCTGTT
AGCAAAGCTTATATTTTTGAAATTAGTTCTGACGGAGAAATTGTGTATTTTGATAAACAAAGTACAGAGCCAAATTGGTA
TCCTTATAAGGACAAATTTGAAAAGGTCACATCGGAAATCGGCAAAATCATTGAAATCAATCAAGGGTTTCTTATGAAAA
TAGGTGAGCGAGGAACAAGTTCTTATGTGTTACTTTGTTTATCAAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

47.974

100

0.48