Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | K7B13_RS08740 | Genome accession | NZ_CP082278 |
| Coordinates | 1784761..1785123 (+) | Length | 120 a.a. |
| NCBI ID | WP_013352421.1 | Uniprot ID | A0A9P1JH52 |
| Organism | Bacillus amyloliquefaciens strain 35M | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1779761..1790123
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K7B13_RS08710 (K7B13_08710) | - | 1780216..1780449 (+) | 234 | WP_003153997.1 | DUF896 domain-containing protein | - |
| K7B13_RS08715 (K7B13_08715) | recP/tkt | 1780616..1782619 (+) | 2004 | WP_115997458.1 | transketolase | Machinery gene |
| K7B13_RS08720 (K7B13_08720) | sirA | 1782770..1783216 (+) | 447 | WP_013352418.1 | sporulation inhibitor of replication protein SirA | - |
| K7B13_RS08725 (K7B13_08725) | - | 1783302..1783520 (+) | 219 | WP_003153994.1 | YneF family protein | - |
| K7B13_RS08730 (K7B13_08730) | - | 1783594..1783767 (-) | 174 | WP_088030684.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| K7B13_RS08735 (K7B13_08735) | - | 1783969..1784676 (+) | 708 | WP_115997459.1 | cytochrome c biogenesis protein CcdA | - |
| K7B13_RS08740 (K7B13_08740) | pilH | 1784761..1785123 (+) | 363 | WP_013352421.1 | response regulator | Machinery gene |
| K7B13_RS08745 (K7B13_08745) | - | 1785203..1785694 (+) | 492 | WP_115997460.1 | CcdC family protein | - |
| K7B13_RS08750 (K7B13_08750) | - | 1785722..1786150 (-) | 429 | WP_115997461.1 | DUF2621 domain-containing protein | - |
| K7B13_RS08755 (K7B13_08755) | - | 1786384..1786755 (-) | 372 | WP_115997462.1 | Hsp20/alpha crystallin family protein | - |
| K7B13_RS08760 (K7B13_08760) | - | 1786850..1786996 (-) | 147 | WP_003153984.1 | small acid-soluble spore protein P | - |
| K7B13_RS08765 (K7B13_08765) | sspO | 1787026..1787172 (-) | 147 | WP_003153982.1 | acid-soluble spore protein SspO | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13259.62 Da Isoelectric Point: 5.2063
>NTDB_id=527735 K7B13_RS08740 WP_013352421.1 1784761..1785123(+) (pilH) [Bacillus amyloliquefaciens strain 35M]
MTRVLVVDDAKFMRVKIREILESANYIVAGEAADGEEALAVYQKIRPDLVTMDITMPVKNGIQALQDILAFDPKAHVIMC
TAMRQQRIVLEAIELGAKDFIVKPFEASKVLEAVGRVTGT
MTRVLVVDDAKFMRVKIREILESANYIVAGEAADGEEALAVYQKIRPDLVTMDITMPVKNGIQALQDILAFDPKAHVIMC
TAMRQQRIVLEAIELGAKDFIVKPFEASKVLEAVGRVTGT
Nucleotide
Download Length: 363 bp
>NTDB_id=527735 K7B13_RS08740 WP_013352421.1 1784761..1785123(+) (pilH) [Bacillus amyloliquefaciens strain 35M]
ATGACACGAGTTTTAGTTGTAGATGACGCCAAGTTCATGAGGGTGAAAATCAGAGAAATTCTGGAATCGGCGAATTACAT
AGTGGCCGGAGAAGCGGCTGACGGCGAGGAAGCCCTGGCGGTATATCAAAAAATACGTCCCGACCTGGTGACAATGGATA
TTACCATGCCGGTCAAAAATGGTATACAGGCGCTGCAGGATATTTTAGCTTTTGACCCGAAAGCCCATGTCATCATGTGC
ACCGCCATGCGGCAGCAGCGGATTGTTCTGGAAGCGATTGAATTAGGCGCTAAAGACTTTATCGTTAAACCGTTTGAAGC
TTCTAAAGTGCTGGAGGCCGTAGGCAGGGTAACGGGAACGTAA
ATGACACGAGTTTTAGTTGTAGATGACGCCAAGTTCATGAGGGTGAAAATCAGAGAAATTCTGGAATCGGCGAATTACAT
AGTGGCCGGAGAAGCGGCTGACGGCGAGGAAGCCCTGGCGGTATATCAAAAAATACGTCCCGACCTGGTGACAATGGATA
TTACCATGCCGGTCAAAAATGGTATACAGGCGCTGCAGGATATTTTAGCTTTTGACCCGAAAGCCCATGTCATCATGTGC
ACCGCCATGCGGCAGCAGCGGATTGTTCTGGAAGCGATTGAATTAGGCGCTAAAGACTTTATCGTTAAACCGTTTGAAGC
TTCTAAAGTGCTGGAGGCCGTAGGCAGGGTAACGGGAACGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.667 |
100 |
0.367 |