Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   YYK_RS09730 Genome accession   NC_018526
Coordinates   1979921..1980685 (+) Length   254 a.a.
NCBI ID   WP_012775418.1    Uniprot ID   A0A0Z9LUD5
Organism   Streptococcus suis S735     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1974921..1985685
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  YYK_RS09715 (YYK_09485) - 1977303..1977986 (-) 684 WP_012775416.1 YoaK family protein -
  YYK_RS09720 (YYK_09490) rlmH 1978011..1978490 (-) 480 WP_012028058.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  YYK_RS09725 (YYK_09495) htrA 1978664..1979860 (+) 1197 WP_012028059.1 S1C family serine protease Regulator
  YYK_RS09730 (YYK_09500) spo0J 1979921..1980685 (+) 765 WP_012775418.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 254 a.a.        Molecular weight: 28966.25 Da        Isoelectric Point: 9.4760

>NTDB_id=52772 YYK_RS09730 WP_012775418.1 1979921..1980685(+) (spo0J) [Streptococcus suis S735]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=52772 YYK_RS09730 WP_012775418.1 1979921..1980685(+) (spo0J) [Streptococcus suis S735]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCTATTAAGGAAAATGGCTTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAAGAA
CTGACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTGCAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACACATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGAAAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAGGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAGCTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Z9LUD5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547


Multiple sequence alignment