Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BAJP3042_RS19430 Genome accession   NZ_CP082243
Coordinates   3992537..3993331 (-) Length   264 a.a.
NCBI ID   WP_007407895.1    Uniprot ID   A7ZAN9
Organism   Bacillus amyloliquefaciens strain JP3042     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3987537..3998331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAJP3042_RS19410 (BAJP3042_19410) - 3987898..3988905 (-) 1008 WP_076424854.1 ThiF family adenylyltransferase -
  BAJP3042_RS19415 (BAJP3042_19415) - 3989137..3990555 (-) 1419 WP_222835544.1 cell wall metabolism sensor histidine kinase WalK -
  BAJP3042_RS19420 (BAJP3042_19420) - 3990552..3990761 (-) 210 WP_015418611.1 winged helix-turn-helix domain-containing protein -
  BAJP3042_RS19425 (BAJP3042_19425) htrA 3991254..3992450 (-) 1197 WP_007407894.1 S1C family serine protease Regulator
  BAJP3042_RS19430 (BAJP3042_19430) vicX 3992537..3993331 (-) 795 WP_007407895.1 MBL fold metallo-hydrolase Regulator
  BAJP3042_RS19435 (BAJP3042_19435) - 3993346..3994185 (-) 840 WP_060562289.1 two-component system regulatory protein YycI -
  BAJP3042_RS19440 (BAJP3042_19440) yycH 3994172..3995530 (-) 1359 WP_080130849.1 two-component system activity regulator YycH -
  BAJP3042_RS19445 (BAJP3042_19445) walK 3995520..3997355 (-) 1836 WP_063093735.1 cell wall metabolism sensor histidine kinase WalK -
  BAJP3042_RS19450 (BAJP3042_19450) walR 3997362..3998069 (-) 708 WP_004393104.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29116.20 Da        Isoelectric Point: 6.0280

>NTDB_id=527655 BAJP3042_RS19430 WP_007407895.1 3992537..3993331(-) (vicX) [Bacillus amyloliquefaciens strain JP3042]
MGLQFSVLASGSTGNAFYLETEEHSFLVDAGLSGKAMDGLMEKIGRKIDDVDGIFVTHEHSDHIKGLGVIARKYGLPVYA
NEKTWKAMENQIGKLDTGQKFLFPMESVKSFGGLDVESFGVSHDAAEPMFYVFHYQGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDGTSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFVAGETFQLFDTDPKIPTPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=527655 BAJP3042_RS19430 WP_007407895.1 3992537..3993331(-) (vicX) [Bacillus amyloliquefaciens strain JP3042]
ATGGGCTTGCAATTTAGCGTGCTTGCGAGCGGGAGTACCGGAAACGCGTTTTATCTGGAGACAGAGGAGCACTCTTTTCT
GGTGGATGCCGGCCTGAGCGGTAAAGCGATGGACGGGCTGATGGAGAAAATCGGCCGCAAGATAGACGACGTCGACGGCA
TCTTTGTCACTCACGAGCACAGCGACCATATTAAAGGGCTCGGCGTCATTGCGAGAAAGTACGGACTTCCCGTCTACGCC
AATGAAAAGACGTGGAAAGCGATGGAGAATCAGATCGGCAAGCTGGATACCGGACAAAAGTTTTTGTTCCCGATGGAAAG
CGTAAAATCCTTCGGCGGGCTTGATGTTGAGTCATTCGGTGTCTCTCATGACGCGGCCGAGCCGATGTTTTATGTTTTCC
ACTACCAAGGCAGAAAGCTCGCACTGATGACGGACACCGGGTATGTGAGCGACAGAATGAAAGGCATTATCCGTTCGGCC
AATGTGTTTGTGTTTGAAAGCAACCATGATGTCGGCATGCTGCAAATGGGCAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGCGATGTCGGCCACGTCTCGAATGAAGATGCGGCGCTCGCCATGACTGATGTCATCGGCGACGGCACATCGCGCA
TCTATTTGGCGCATCTGAGCCAAGACAACAATATGAAGGAACTGGCGAGAATGTCCGTGCAGCAGACATTGGCTGCGAAA
GGATTTGTCGCCGGGGAAACGTTTCAGTTATTTGATACCGATCCGAAAATCCCGACGCCGCTGTGCGCCGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7ZAN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

52.852

99.621

0.527