Detailed information NTG0527573

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BAJP3042_RS08085
• Genome accession: NZ_CP082243
• Coordinates: 1633854..1634843 (+)
• Length: 329 a.a.
• NCBI ID: WP_003154301.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain JP3042
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1628854..1639843

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAJP3042_RS08070 (BAJP3042_08070)	acpP	1629051..1629284 (+)	234	WP_003154310.1	acyl carrier protein	-
BAJP3042_RS08075 (BAJP3042_08075)	rncS	1629423..1630172 (+)	750	WP_012117543.1	ribonuclease III	-
BAJP3042_RS08080 (BAJP3042_08080)	smc	1630274..1633834 (+)	3561	WP_012117544.1	chromosome segregation protein SMC	-
BAJP3042_RS08085 (BAJP3042_08085)	pilA	1633854..1634843 (+)	990	WP_003154301.1	signal recognition particle-docking protein FtsY	Machinery gene
BAJP3042_RS08090 (BAJP3042_08090)	-	1634927..1635697 (+)	771	WP_222835975.1	phosphotransferase family protein	-
BAJP3042_RS08095 (BAJP3042_08095)	-	1635820..1636152 (+)	333	WP_003154299.1	putative DNA-binding protein	-
BAJP3042_RS08100 (BAJP3042_08100)	ffh	1636166..1637506 (+)	1341	WP_222835976.1	signal recognition particle protein	-
BAJP3042_RS08105 (BAJP3042_08105)	rpsP	1637612..1637884 (+)	273	WP_003154296.1	30S ribosomal protein S16	-
BAJP3042_RS08110 (BAJP3042_08110)	-	1637884..1638129 (+)	246	WP_015417460.1	KH domain-containing protein	-
BAJP3042_RS08115 (BAJP3042_08115)	-	1638220..1638606 (+)	387	WP_003154291.1	YlqD family protein	-
BAJP3042_RS08120 (BAJP3042_08120)	rimM	1638611..1639135 (+)	525	WP_222835977.1	ribosome maturation factor RimM	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36096.28 Da
• Isoelectric Point: 5.0098

>NTDB_id=527573 BAJP3042_RS08085 WP_003154301.1 1633854..1634843(+) (pilA) [Bacillus amyloliquefaciens strain JP3042]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFSNKVNELVSRYRKVDEDFFEELEEVLIGADVGFTTVMELIDELKKEV
KLKNIQDPQEVQSVISEKLVDIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKLKNEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQAAGSDPAAVIYDAVHAAKARGADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQRFDAESYVYGLF
SDLVEKAED

Nucleotide

• Length: 990 bp

>NTDB_id=527573 BAJP3042_RS08085 WP_003154301.1 1633854..1634843(+) (pilA) [Bacillus amyloliquefaciens strain JP3042]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACGAAACAGACAGACTCCGTCTCTGAAAAATTTAAAGATGGTCTTGA
AAAAACAAGAAATTCCTTCTCAAATAAAGTGAACGAACTCGTCTCCCGCTACCGGAAAGTCGACGAGGATTTCTTCGAGG
AGCTTGAGGAAGTGCTGATTGGCGCTGACGTAGGTTTTACAACCGTTATGGAGCTGATTGATGAGCTCAAAAAAGAAGTG
AAGCTGAAAAACATCCAGGATCCTCAGGAAGTGCAGTCCGTCATTTCTGAAAAGCTTGTCGACATTTATAACAGCGGCGA
CGAACAGATTTCTGAATTAAATATTCAGGACGGGCGCCTGAACGTTATTCTGCTTGTCGGGGTAAACGGCGTCGGAAAAA
CGACAACGATCGGAAAACTTGCCCATAAGCTGAAGAATGAAGGCAAATCCGTTGTGCTCGCTGCCGGAGACACCTTCAGA
GCCGGGGCGATTGAACAGCTTGAAGTATGGGGGGAGCGTACAGGCGTGCCTGTCATTAAGCAGGCTGCCGGAAGCGACCC
TGCTGCGGTTATTTATGATGCCGTACACGCGGCTAAAGCAAGAGGAGCGGATGTGCTGATTTGTGATACGGCCGGCCGCC
TTCAGAATAAAGTAAACTTAATGAAAGAGCTTGAAAAAGTCAAACGTGTCATCGAACGCGAAGTGCCTGAGGCTCCGCAT
GAGGTTCTCCTTGCGCTGGACGCGACGACAGGCCAAAATGCGATGGCGCAGGCGAAAGAATTCTCCAAAGCGACGAATGT
GACGGGTATCGCGTTAACGAAGCTTGACGGCACCGCAAAAGGCGGTATCGTCCTGGCGATCCGCAATGAGCTTCACATCC
CCGTGAAACTGGTCGGCCTCGGAGAAAAGGTTGACGATCTCCAGCGGTTTGATGCAGAATCTTACGTATACGGTCTCTTT
TCTGATTTAGTTGAAAAAGCCGAGGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (33-99)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	45.333	91.185	0.413