Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   K6973_RS10085 Genome accession   NZ_CP082206
Coordinates   2029580..2030029 (-) Length   149 a.a.
NCBI ID   WP_003053369.1    Uniprot ID   A0ABU0A4B8
Organism   Streptococcus dysgalactiae strain DY107     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2024580..2035029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6973_RS10065 (K6973_10065) - 2024654..2025100 (-) 447 WP_222819351.1 dUTP diphosphatase -
  K6973_RS10070 (K6973_10070) - 2025208..2025975 (-) 768 WP_138126588.1 epoxyqueuosine reductase QueH -
  K6973_RS10075 (K6973_10075) - 2026094..2027878 (-) 1785 WP_222819352.1 ABC transporter ATP-binding protein -
  K6973_RS10080 (K6973_10080) - 2027878..2029587 (-) 1710 WP_138126592.1 ABC transporter ATP-binding protein -
  K6973_RS10085 (K6973_10085) rcrR 2029580..2030029 (-) 450 WP_003053369.1 MarR family transcriptional regulator Regulator
  K6973_RS10090 (K6973_10090) - 2030230..2031246 (+) 1017 WP_003053365.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  K6973_RS10095 (K6973_10095) hasC 2031278..2032180 (+) 903 WP_138126594.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  K6973_RS10100 (K6973_10100) - 2032361..2032987 (+) 627 WP_218654864.1 DUF6198 family protein -
  K6973_RS10105 (K6973_10105) - 2033164..2033838 (-) 675 WP_222819353.1 rhomboid family intramembrane serine protease -
  K6973_RS10110 (K6973_10110) - 2033835..2034362 (-) 528 WP_222819354.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17415.30 Da        Isoelectric Point: 9.5972

>NTDB_id=527498 K6973_RS10085 WP_003053369.1 2029580..2030029(-) (rcrR) [Streptococcus dysgalactiae strain DY107]
MSRVIADLRELTHQVEQISDEIAKKYDLEHLAGPQGHVLVFLSKHQDQEIFVKDIEKELQISKSVTSNLVKRMVKNGFIK
VLPSQVDKRYKQVILAKAGREKLPLLQECRKDIEHYFFKEITREELLTVKKVIQQLKQNMLTYKGENDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=527498 K6973_RS10085 WP_003053369.1 2029580..2030029(-) (rcrR) [Streptococcus dysgalactiae strain DY107]
ATGTCACGAGTAATTGCAGATTTGCGTGAGTTGACACATCAGGTTGAACAAATTAGCGATGAAATTGCAAAGAAATATGA
CCTTGAACATTTAGCAGGACCCCAGGGACATGTTTTGGTTTTTCTATCCAAGCATCAAGATCAAGAAATTTTTGTGAAAG
ACATTGAAAAAGAACTCCAAATTTCAAAATCAGTTACCAGTAATCTTGTTAAACGCATGGTCAAAAATGGTTTTATTAAG
GTTCTTCCTTCCCAAGTAGACAAGCGCTACAAGCAAGTCATTTTGGCTAAGGCAGGACGAGAGAAGCTGCCTTTGCTGCA
AGAATGTCGCAAGGATATTGAACATTATTTCTTTAAAGAAATCACGAGAGAGGAGTTGCTGACGGTTAAAAAGGTGATTC
AGCAGCTTAAGCAAAATATGCTAACTTATAAAGGAGAGAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

45.714

93.96

0.43