Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   K6973_RS04760 Genome accession   NZ_CP082206
Coordinates   928413..930185 (+) Length   590 a.a.
NCBI ID   WP_138125371.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain DY107     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 923413..935185
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6973_RS04745 (K6973_04745) - 923478..924686 (+) 1209 WP_222819629.1 CCA tRNA nucleotidyltransferase -
  K6973_RS04750 (K6973_04750) - 924683..926560 (+) 1878 WP_222819630.1 ABC-F family ATP-binding cassette domain-containing protein -
  K6973_RS04755 (K6973_04755) rcrP 926668..928413 (+) 1746 WP_138125369.1 ABC transporter ATP-binding protein Regulator
  K6973_RS04760 (K6973_04760) rcrQ 928413..930185 (+) 1773 WP_138125371.1 ABC transporter ATP-binding protein Regulator
  K6973_RS04765 (K6973_04765) gdhA 930375..931724 (+) 1350 WP_138125373.1 NADP-specific glutamate dehydrogenase -
  K6973_RS04770 (K6973_04770) - 931849..932259 (+) 411 WP_012766836.1 peptide deformylase -
  K6973_RS04775 (K6973_04775) - 932447..934471 (-) 2025 WP_138125375.1 bifunctional metallophosphatase/5'-nucleotidase -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65993.47 Da        Isoelectric Point: 5.7845

>NTDB_id=527449 K6973_RS04760 WP_138125371.1 928413..930185(+) (rcrQ) [Streptococcus dysgalactiae strain DY107]
MAEQHVFKRVWTYLRAYRGLIFLAVFLKIISAVMSVLEPFVLGLVITELSSNLLDMAKGIEGAGINTSYIAFLLLVYFIR
ALCYEIGAYGSNYVMTKAVQSTIRDLRQALSQKINRIPVSYFDQHQFGDMLGRFTSDVETVSNALQQSFLQIVNAFLTIF
LVMGMVLYLNLTLALIVIVAIPIIYASSQFILKKSQPYFKEQAKVLGEMNGFVQENLSGFNVLKLYGREEASEQAFHQIT
EHLQEVGFKASFLSGIMMPVLHFISDSVYMIVALVAGLQVMAGQLTIGNMQAFVQYIWQISQPIQTITQLAGLLQSAKSS
LERIFAVLDEADDAMLVTDQLDEDLTGQVSFNHVDFSYQADKPLIKEFTLDVNPGEMIAIVGPTGAGKTTLINLLMRFYD
VNKGSITVDGHDIRDLSRQSYRRQFGMVLQDAWLYEGTIQDNLRFGNLEASDEAIVEAAKAANVDHFIRTLPGGYHMVMN
QESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKRLMKGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGNHDSLLAAQGFYFDLYHSQFKSSQP

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=527449 K6973_RS04760 WP_138125371.1 928413..930185(+) (rcrQ) [Streptococcus dysgalactiae strain DY107]
ATGGCAGAGCAACATGTTTTTAAGCGGGTGTGGACCTATTTAAGGGCCTACCGTGGCTTAATCTTTTTAGCAGTTTTCCT
TAAAATTATCAGTGCTGTCATGAGTGTCTTGGAACCCTTTGTACTTGGTTTAGTCATTACAGAATTGTCATCTAATCTTC
TTGATATGGCTAAGGGAATTGAAGGAGCAGGGATTAATACCTCTTATATTGCTTTTTTACTGCTTGTCTATTTTATTCGT
GCATTATGTTATGAAATCGGAGCCTACGGGTCAAATTATGTCATGACCAAGGCTGTTCAATCGACTATTCGTGATTTGAG
ACAGGCCTTGAGTCAAAAAATTAATCGTATTCCTGTCTCTTATTTTGACCAACACCAGTTTGGGGATATGCTAGGACGCT
TCACCTCAGATGTTGAGACAGTGTCAAATGCTTTGCAACAGTCTTTTTTGCAGATTGTCAATGCCTTTCTCACCATTTTT
CTCGTGATGGGAATGGTCTTGTACCTCAATCTGACACTAGCTTTGATTGTGATTGTTGCTATTCCTATTATCTATGCTTC
ATCTCAATTCATTTTAAAAAAATCACAACCTTATTTTAAAGAGCAAGCTAAGGTGTTAGGAGAGATGAATGGTTTTGTTC
AGGAAAATCTATCGGGTTTTAACGTCTTAAAACTTTACGGCCGCGAAGAAGCCTCAGAGCAAGCCTTCCATCAGATTACT
GAACACTTGCAAGAGGTTGGGTTTAAGGCAAGCTTTTTATCCGGTATTATGATGCCTGTTTTGCATTTTATTTCTGATTC
TGTCTATATGATTGTTGCTTTGGTCGCAGGTCTGCAAGTTATGGCAGGACAATTGACCATTGGGAATATGCAAGCTTTTG
TTCAATATATTTGGCAAATCAGTCAGCCAATTCAAACCATTACCCAGTTAGCAGGTTTATTACAGAGTGCTAAATCATCC
TTAGAACGTATTTTTGCGGTTCTGGACGAGGCAGATGATGCCATGCTTGTGACAGATCAACTGGATGAGGATTTAACAGG
TCAAGTCTCATTTAACCATGTGGATTTTTCCTATCAGGCTGATAAACCTTTGATTAAAGAATTTACACTTGATGTTAACC
CCGGTGAGATGATTGCGATTGTAGGACCAACTGGAGCTGGGAAAACGACTCTCATTAACCTCTTGATGCGTTTTTATGAT
GTTAATAAAGGATCTATTACTGTTGATGGGCATGATATTCGTGACCTGTCACGTCAATCCTATCGTCGCCAATTTGGTAT
GGTCCTACAAGATGCTTGGCTTTACGAAGGGACAATCCAAGATAACCTTCGCTTTGGGAACCTTGAAGCCAGCGATGAGG
CTATTGTAGAAGCAGCCAAAGCTGCCAATGTGGATCATTTTATCAGAACCTTGCCAGGTGGGTACCACATGGTGATGAAC
CAAGAATCTAGTAATATTTCCTTAGGTCAAAAACAACTCTTAACCATTGCAAGGGCCTTGTTGGCTGATCCTAAAATTCT
GATTTTAGATGAAGCGACCTCTTCAGTAGATACTAGGCTAGAATTATTGATTCAAAAGGCGATGAAGCGGTTAATGAAAG
GACGAACAAGCTTTGTGATCGCTCACCGTCTGTCTACAATTCAAGAAGCTGATAAGATTCTAGTATTAAAAGATGGTCAG
ATCATTGAACAAGGGAACCATGATAGTTTATTGGCTGCTCAAGGTTTCTATTTTGATCTCTATCATAGTCAATTTAAATC
CAGTCAACCCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(366-514)

ABC transporter transmembrane region (ABC_membrane)

(21-303)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

43.463

99.831

0.434