Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   K6973_RS04755 Genome accession   NZ_CP082206
Coordinates   926668..928413 (+) Length   581 a.a.
NCBI ID   WP_138125369.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain DY107     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 921668..933413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6973_RS04735 (K6973_04735) - 922130..922510 (+) 381 WP_003050280.1 DUF1149 family protein -
  K6973_RS04740 (K6973_04740) - 922510..923358 (+) 849 WP_129555817.1 DegV family protein -
  K6973_RS04745 (K6973_04745) - 923478..924686 (+) 1209 WP_222819629.1 CCA tRNA nucleotidyltransferase -
  K6973_RS04750 (K6973_04750) - 924683..926560 (+) 1878 WP_222819630.1 ABC-F family ATP-binding cassette domain-containing protein -
  K6973_RS04755 (K6973_04755) rcrP 926668..928413 (+) 1746 WP_138125369.1 ABC transporter ATP-binding protein Regulator
  K6973_RS04760 (K6973_04760) rcrQ 928413..930185 (+) 1773 WP_138125371.1 ABC transporter ATP-binding protein Regulator
  K6973_RS04765 (K6973_04765) gdhA 930375..931724 (+) 1350 WP_138125373.1 NADP-specific glutamate dehydrogenase -
  K6973_RS04770 (K6973_04770) - 931849..932259 (+) 411 WP_012766836.1 peptide deformylase -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65200.83 Da        Isoelectric Point: 5.5988

>NTDB_id=527448 K6973_RS04755 WP_138125369.1 926668..928413(+) (rcrP) [Streptococcus dysgalactiae strain DY107]
MGLIWSYLSSKPKWLALDILGGLLFVLVNLGLPTILARMIDQGIMQQDTKALYGWTLVMFVIIVLGVLGRIILSYASGKL
TTTMIKELRNDMYRQLQDYSHTEYEKIGVASLVTRMTSDAFVLMQFAEMSLRLGVVTPLMMIFSVLMIFLTSPSLAWIVA
VSMPFLVLVVVYVAVKTRPLSEKQQESLDHINQLVRENLTGLRVIRAFSREAFQQERFDERNQEYAGISKRLFTLTGLTE
PLFVQIIIAMIVAIVWFALDPLAKGQIQIGDLVAFIEYSFHALFSFLMFANLFTMYPKMAVSSKRIKEVMDMPISISKNE
DGVTETLTRGYLEFDNVTFAYPGETESPVLHNISFKTKPGETIAFIGSTGSGKSSLVNLIPRFYDVTFGRILVDGVDVRD
YQLKSLRAKIGFIPQKALLFTGTIEDNLKYGKADASYWELDEATDVSQARAFIASREKGYQTHLAEAGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYQTDAALRKRLKEVTEDATVLIVAQRVGTIMDADQIIVLDQGEIVGRGKHEELMATNA
IYREIADSQLNKGNLMEEEVD

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=527448 K6973_RS04755 WP_138125369.1 926668..928413(+) (rcrP) [Streptococcus dysgalactiae strain DY107]
ATGGGGCTGATTTGGTCGTATTTATCATCAAAGCCTAAATGGTTGGCTTTGGACATTTTAGGTGGTCTATTATTTGTTCT
GGTTAATTTAGGATTGCCCACTATTTTAGCTCGGATGATAGACCAAGGAATCATGCAGCAGGATACCAAAGCCTTATATG
GCTGGACGTTGGTCATGTTTGTCATTATTGTGTTAGGTGTTCTTGGTCGAATTATCTTATCCTATGCATCTGGTAAGTTA
ACGACAACCATGATCAAGGAGCTGCGCAATGACATGTATCGTCAGTTGCAGGATTACTCTCATACAGAATATGAAAAAAT
TGGGGTTGCTTCTTTGGTTACCCGAATGACAAGTGATGCCTTTGTGCTCATGCAGTTTGCTGAAATGTCTTTACGTTTAG
GAGTAGTGACGCCCTTAATGATGATTTTTTCAGTGCTGATGATTTTCTTGACAAGTCCATCGTTAGCATGGATTGTAGCG
GTGTCCATGCCTTTTTTGGTGCTGGTTGTTGTTTATGTCGCCGTCAAAACAAGGCCTCTCTCTGAAAAACAACAAGAAAG
TTTAGACCACATTAATCAGTTAGTCAGAGAAAATTTGACTGGCTTGCGCGTGATTAGAGCCTTTTCGAGAGAAGCGTTTC
AACAGGAACGTTTTGATGAGCGTAATCAAGAATACGCCGGCATTTCAAAACGTCTCTTCACCTTAACAGGATTGACAGAA
CCGCTATTTGTGCAAATCATTATTGCCATGATTGTAGCCATTGTTTGGTTTGCCTTAGACCCTTTGGCTAAGGGACAAAT
TCAAATTGGGGATTTGGTAGCCTTTATCGAGTATAGTTTTCATGCCCTTTTTTCGTTTTTGATGTTTGCTAATCTCTTTA
CCATGTATCCTAAAATGGCAGTTTCCAGCAAACGGATCAAAGAAGTCATGGACATGCCAATCTCTATTTCTAAAAATGAA
GATGGGGTAACAGAGACCTTGACAAGAGGTTACCTCGAATTTGACAATGTCACCTTTGCTTATCCTGGAGAAACAGAAAG
TCCTGTTCTACATAACATTTCTTTTAAAACCAAGCCTGGGGAAACCATCGCTTTTATTGGCTCAACAGGGTCAGGAAAAT
CATCCTTGGTGAATTTAATTCCTCGATTTTACGACGTGACGTTTGGGAGAATCTTGGTCGATGGGGTAGATGTCAGAGAT
TATCAGTTAAAATCTCTTCGTGCTAAAATTGGTTTCATCCCACAAAAAGCTCTGCTATTTACAGGAACTATCGAAGACAA
TTTAAAATATGGTAAGGCAGATGCTAGCTATTGGGAATTAGATGAAGCTACGGATGTGTCTCAAGCTAGAGCATTTATTG
CTAGCCGCGAAAAAGGCTATCAGACCCATCTAGCAGAAGCAGGAAGCAATTTATCAGGTGGTCAGAAACAACGGCTATCC
ATTGCCCGTGCGGTTGTTAAAAAGCCCGATATTTATATCTTTGATGATTCTTTTTCGGCACTAGATTACCAAACCGATGC
TGCTTTAAGGAAGCGCCTGAAAGAAGTAACAGAGGATGCGACTGTTTTGATTGTAGCTCAACGGGTTGGGACTATCATGG
ATGCCGATCAAATCATCGTTCTAGATCAAGGTGAAATTGTCGGTCGAGGCAAGCATGAGGAATTGATGGCAACCAATGCT
ATTTACCGTGAAATTGCTGATTCGCAATTAAACAAAGGAAATCTCATGGAAGAGGAGGTGGACTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(26-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.775

91.738

0.365