Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | I6I41_RS20270 | Genome accession | NZ_CP068135 |
| Coordinates | 4088239..4090674 (-) | Length | 811 a.a. |
| NCBI ID | WP_000971184.1 | Uniprot ID | A0A9X5NCJ1 |
| Organism | Bacillus cereus strain FDAARGOS_1084 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4083239..4095674
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6I41_RS20250 (I6I41_20250) | ispD | 4083723..4084403 (-) | 681 | WP_000288283.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| I6I41_RS20255 (I6I41_20255) | - | 4084420..4085529 (-) | 1110 | WP_000919677.1 | PIN/TRAM domain-containing protein | - |
| I6I41_RS20260 (I6I41_20260) | disA | 4085690..4086763 (-) | 1074 | WP_000392158.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| I6I41_RS20265 (I6I41_20265) | radA | 4086767..4088143 (-) | 1377 | WP_001085202.1 | DNA repair protein RadA | Machinery gene |
| I6I41_RS20270 (I6I41_20270) | clpC | 4088239..4090674 (-) | 2436 | WP_000971184.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| I6I41_RS20275 (I6I41_20275) | - | 4090697..4091761 (-) | 1065 | WP_000050843.1 | protein arginine kinase | - |
| I6I41_RS20280 (I6I41_20280) | - | 4091766..4092314 (-) | 549 | WP_000128399.1 | UvrB/UvrC motif-containing protein | - |
| I6I41_RS20285 (I6I41_20285) | ctsR | 4092485..4092946 (-) | 462 | WP_001244558.1 | transcriptional regulator CtsR | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90563.41 Da Isoelectric Point: 6.3584
>NTDB_id=527404 I6I41_RS20270 WP_000971184.1 4088239..4090674(-) (clpC) [Bacillus cereus strain FDAARGOS_1084]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
TFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
TFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=527404 I6I41_RS20270 WP_000971184.1 4088239..4090674(-) (clpC) [Bacillus cereus strain FDAARGOS_1084]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTGAGCCCGGAAAAAGTGCAAAAAGAGGTAGAAGCGTTAATTGGACGTGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCTCGTGCTAAAAAAGTTATTGAATTGTCTATGGATGAAGCGCGTAAGCTAGGACATTCTTACGTTGGAACAGAACA
TATTTTACTTGGCTTAATCCGTGAAGGTGAAGGTGTAGCGGCACGTGTTTTAAATAATTTAGGCGTAAGCCTCAACAAAG
CAAGACAACAAGTATTACAACTTCTTGGAAGTAACGAAGCAAGTTCAGGTCACCAAGGTGGTTCATCGACAAATGCCAAT
ACACCGACACTAGACAGTTTAGCACGCGACTTAACAGTTGTTGCACGTGAGAATCGTTTGGATCCTGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTGTTAATTGGAGAACCTGGTGTAG
GTAAAACAGCAATTGCTGAAGGGTTAGCACAGCAAATCGTAAATAATGAAGTTCCTGAAACGTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGAACAGTGGTAGCTGGGACGAAATATCGTGGTGAGTTTGAAGATCGTTTAAAGAAAGTAATGGA
TGAAATACGTCAAGCAGGGAATATTATTCTATTTATTGATGAACTTCATACATTAATCGGTGCAGGTGGAGCAGAAGGTG
CAATCGATGCATCAAATATTTTAAAACCATCTTTAGCACGCGGAGAATTACAATGTATTGGTGCGACAACTTTAGATGAG
TATCGTAAATATATTGAAAAGGATGCAGCTTTAGAGAGACGTTTCCAGCCAATTCATGTTGATGAGCCGAGTCTAGAAGA
ATCAACTCAAATCTTGAAAGGTTTACGCGATCGTTATGAGGCGCATCACCGTGTGTCTATTACAGATGATGCAATTGATG
CAGCTGTAAAACTTTCTGATCGTTATATTACGGATCGTTTCTTACCGGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAGGTTCGCTTACGCTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTCGAAAAGA
AAAAGATGCGGCTGTACAAAGTCAAGAGTTTGAAAAGGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAGAAAT
TGGAAGATACAAAGCGTCAGTGGAAAGAGCAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACACGTATCCCTGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCATGATCGTGTCATTGGCCAGGATGAAGCGGTAGTGGCTGTAGCGAAAGCTGTTCGTCGTGCAAGAGCAGGATTGAAAG
ATCCGAAACGTCCAATTGGTTCATTTATTTTCTTAGGGCCAACAGGTGTAGGTAAAACAGAATTAGCAAGAGCATTGGCA
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATTGATATGTCTGAGTATATGGAGAAACATTCAACTTCTCGCTT
AGTTGGTTCTCCTCCAGGATATGTTGGGTATGAAGAAGGCGGACAATTAACAGAGAAGGTTCGTCGTAAGCCGTATTCAG
TTGTCCTATTAGATGAAGTAGAGAAGGCGCATCCCGATGTATTTAATATTTTACTACAGGTATTGGAAGATGGTCGTTTA
ACTGATTCTAAAGGACGTACAGTTGACTTCCGTAATACGATTGTTATTATGACGTCTAACGTTGGTGCTGAGGCGTTAAA
ACGTAACAAACATCTTGGATTTAACGTACAAGATGAAAGCCGTGATTATTCGGATATGAAAGGTAAAGTAATGGATGAGC
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTGACTCTTATGGTAAATCAGTTAGTGAATCGCTTAAAAGAACAAGAAATTGAATTGCAATTAACAGAAGG
GGCGATTGCAGCTATTGCTGATAAAGGGTTTGATCGTGAATATGGTGCTCGTCCACTACGTAGAGCAATTCAGAAGCATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGGCAAAAAGTTATCTTTGATGTAGAAGGGGAA
ACATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTGAGCCCGGAAAAAGTGCAAAAAGAGGTAGAAGCGTTAATTGGACGTGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCTCGTGCTAAAAAAGTTATTGAATTGTCTATGGATGAAGCGCGTAAGCTAGGACATTCTTACGTTGGAACAGAACA
TATTTTACTTGGCTTAATCCGTGAAGGTGAAGGTGTAGCGGCACGTGTTTTAAATAATTTAGGCGTAAGCCTCAACAAAG
CAAGACAACAAGTATTACAACTTCTTGGAAGTAACGAAGCAAGTTCAGGTCACCAAGGTGGTTCATCGACAAATGCCAAT
ACACCGACACTAGACAGTTTAGCACGCGACTTAACAGTTGTTGCACGTGAGAATCGTTTGGATCCTGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTGTTAATTGGAGAACCTGGTGTAG
GTAAAACAGCAATTGCTGAAGGGTTAGCACAGCAAATCGTAAATAATGAAGTTCCTGAAACGTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGAACAGTGGTAGCTGGGACGAAATATCGTGGTGAGTTTGAAGATCGTTTAAAGAAAGTAATGGA
TGAAATACGTCAAGCAGGGAATATTATTCTATTTATTGATGAACTTCATACATTAATCGGTGCAGGTGGAGCAGAAGGTG
CAATCGATGCATCAAATATTTTAAAACCATCTTTAGCACGCGGAGAATTACAATGTATTGGTGCGACAACTTTAGATGAG
TATCGTAAATATATTGAAAAGGATGCAGCTTTAGAGAGACGTTTCCAGCCAATTCATGTTGATGAGCCGAGTCTAGAAGA
ATCAACTCAAATCTTGAAAGGTTTACGCGATCGTTATGAGGCGCATCACCGTGTGTCTATTACAGATGATGCAATTGATG
CAGCTGTAAAACTTTCTGATCGTTATATTACGGATCGTTTCTTACCGGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAGGTTCGCTTACGCTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAAATTCGAAAAGA
AAAAGATGCGGCTGTACAAAGTCAAGAGTTTGAAAAGGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAGAAAT
TGGAAGATACAAAGCGTCAGTGGAAAGAGCAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACACGTATCCCTGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCATGATCGTGTCATTGGCCAGGATGAAGCGGTAGTGGCTGTAGCGAAAGCTGTTCGTCGTGCAAGAGCAGGATTGAAAG
ATCCGAAACGTCCAATTGGTTCATTTATTTTCTTAGGGCCAACAGGTGTAGGTAAAACAGAATTAGCAAGAGCATTGGCA
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATTGATATGTCTGAGTATATGGAGAAACATTCAACTTCTCGCTT
AGTTGGTTCTCCTCCAGGATATGTTGGGTATGAAGAAGGCGGACAATTAACAGAGAAGGTTCGTCGTAAGCCGTATTCAG
TTGTCCTATTAGATGAAGTAGAGAAGGCGCATCCCGATGTATTTAATATTTTACTACAGGTATTGGAAGATGGTCGTTTA
ACTGATTCTAAAGGACGTACAGTTGACTTCCGTAATACGATTGTTATTATGACGTCTAACGTTGGTGCTGAGGCGTTAAA
ACGTAACAAACATCTTGGATTTAACGTACAAGATGAAAGCCGTGATTATTCGGATATGAAAGGTAAAGTAATGGATGAGC
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTGACTCTTATGGTAAATCAGTTAGTGAATCGCTTAAAAGAACAAGAAATTGAATTGCAATTAACAGAAGG
GGCGATTGCAGCTATTGCTGATAAAGGGTTTGATCGTGAATATGGTGCTCGTCCACTACGTAGAGCAATTCAGAAGCATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGGCAAAAAGTTATCTTTGATGTAGAAGGGGAA
ACATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
86.049 |
99.877 |
0.859 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.375 |
98.644 |
0.497 |
| clpC | Streptococcus thermophilus LMD-9 |
45.969 |
100 |
0.471 |
| clpC | Streptococcus mutans UA159 |
45 |
100 |
0.466 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.476 |
100 |
0.465 |
| clpC | Streptococcus pneumoniae D39 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae Rx1 |
46.675 |
98.274 |
0.459 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.375 |
98.644 |
0.457 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.55 |
79.778 |
0.419 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.735 |
78.175 |
0.404 |