Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   K6974_RS08680 Genome accession   NZ_CP082204
Coordinates   1719828..1720310 (+) Length   160 a.a.
NCBI ID   WP_024381385.1    Uniprot ID   -
Organism   Streptococcus suis strain FJSM5     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1714828..1725310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6974_RS08645 (K6974_08560) - 1715199..1715369 (+) 171 WP_012775205.1 DUF3042 family protein -
  K6974_RS08650 (K6974_08565) - 1715465..1716631 (-) 1167 WP_222337068.1 MFS transporter -
  K6974_RS08655 (K6974_08570) - 1716834..1717982 (+) 1149 WP_014637706.1 cobalamin-independent methionine synthase II family protein -
  K6974_RS08660 (K6974_08575) - 1717994..1718218 (-) 225 WP_002941418.1 hypothetical protein -
  K6974_RS08665 (K6974_08580) - 1718209..1718985 (-) 777 WP_261311687.1 hypothetical protein -
  K6974_RS08670 - 1718982..1719227 (-) 246 WP_248039271.1 hypothetical protein -
  K6974_RS08675 (K6974_08585) folE 1719230..1719653 (-) 424 Protein_1668 GTP cyclohydrolase I FolE -
  K6974_RS08680 (K6974_08590) mutX 1719828..1720310 (+) 483 WP_024381385.1 8-oxo-dGTP diphosphatase Machinery gene
  K6974_RS08685 (K6974_08595) - 1720359..1721036 (-) 678 WP_024410402.1 DUF4956 domain-containing protein -
  K6974_RS08690 (K6974_08600) - 1721023..1721766 (-) 744 WP_029185207.1 polyphosphate polymerase domain-containing protein -
  K6974_RS08695 (K6974_08605) - 1721961..1722263 (+) 303 WP_029180044.1 hypothetical protein -
  K6974_RS08700 (K6974_08610) - 1722284..1722550 (-) 267 WP_014637821.1 DUF2087 domain-containing protein -
  K6974_RS08705 (K6974_08615) pheT 1722871..1725270 (-) 2400 WP_222337069.1 phenylalanine--tRNA ligase subunit beta -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18540.89 Da        Isoelectric Point: 4.4960

>NTDB_id=527263 K6974_RS08680 WP_024381385.1 1719828..1720310(+) (mutX) [Streptococcus suis strain FJSM5]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=527263 K6974_RS08680 WP_024381385.1 1719828..1720310(+) (mutX) [Streptococcus suis strain FJSM5]
ATGACCAAAAAACCTGTCCAACTGGCTACGATTTGCTACATTGATAATGGTAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAATGACGTCCATCAAGGAAAATGGATTGGAGTTGGCGGCAAACTGGAACCCGGTGAAACACCGCAGGCTTGCG
CTATTCGAGAAGTCTTTGAAGAAACAGGTCTAACAGTCACCAAGCACGCCCTAAAAGGAGTCATCACCTTTCCAGACTTC
ACCCCAAATACAGATTGGTACACCTATGTCTTTAAGATTACCGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
TTTAGAATGGGTTCCTTATGACCAAGTGCTCTCCAAACCAACCTGGGAAGGGGACAGACACTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGACAAACTGCTTGATTATAGCGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.046

95.625

0.775