Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   I6I81_RS03780 Genome accession   NZ_CP068122
Coordinates   708722..710401 (-) Length   559 a.a.
NCBI ID   WP_010719788.1    Uniprot ID   A0A1V8X977
Organism   Enterococcus hirae strain FDAARGOS_1124     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 703722..715401
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I81_RS03750 (I6I81_03770) ftsL 704750..705145 (-) 396 WP_010719782.1 cell division protein FtsL -
  I6I81_RS03755 (I6I81_03775) rsmH 705150..706109 (-) 960 WP_010738202.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  I6I81_RS03760 (I6I81_03780) mraZ 706130..706561 (-) 432 WP_014834189.1 division/cell wall cluster transcriptional repressor MraZ -
  I6I81_RS03765 (I6I81_03785) - 706733..707101 (-) 369 WP_010719785.1 DUF3397 domain-containing protein -
  I6I81_RS03770 (I6I81_03790) - 707357..708313 (+) 957 WP_010738203.1 magnesium transporter CorA family protein -
  I6I81_RS03775 (I6I81_03795) - 708383..708499 (+) 117 WP_010719787.1 DUF4044 domain-containing protein -
  I6I81_RS03780 (I6I81_03800) recN 708722..710401 (-) 1680 WP_010719788.1 DNA repair protein RecN Machinery gene
  I6I81_RS03785 (I6I81_03805) argR 710419..710868 (-) 450 WP_010719789.1 arginine repressor -
  I6I81_RS03790 (I6I81_03810) - 710968..711786 (-) 819 WP_010738204.1 TlyA family RNA methyltransferase -
  I6I81_RS03795 (I6I81_03815) - 711801..712685 (-) 885 WP_010719791.1 polyprenyl synthetase family protein -
  I6I81_RS03800 (I6I81_03820) - 712685..712909 (-) 225 WP_010719792.1 exodeoxyribonuclease VII small subunit -
  I6I81_RS03805 (I6I81_03825) xseA 712915..714255 (-) 1341 WP_081115115.1 exodeoxyribonuclease VII large subunit -
  I6I81_RS03810 (I6I81_03830) - 714256..715101 (-) 846 WP_010738206.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 559 a.a.        Molecular weight: 63022.25 Da        Isoelectric Point: 4.5725

>NTDB_id=527233 I6I81_RS03780 WP_010719788.1 708722..710401(-) (recN) [Enterococcus hirae strain FDAARGOS_1124]
MLQEISITNFAIIPELHLSFHKGMTALTGETGAGKSIIIDALGLLAGGRGSSDYIRQGADKCILEGLFEWPSQEGFTELM
EELGIESDGDNLIVRRDMALTGKNVCRVNGHIVTLANLRRIGSYLVDIQGQNEHQELLQPEAHLNLLDRFGDRTFQQQKK
KYQKEYAIYRELERKMRKVQQNEKSFVQRIDMLHFQQEEIAAADLQVGEEEQLSEEREKLSNYQKIVDSFASGYSALSAG
EPSSVDNVGLAVSELQSIAHLDNEYEAIVENVQSAYYLLQDAIGDMSRQIDLLELDENRLEEVNQRLELIRQLKRKYGES
VEAILDYYEEITKELDSSDFSEGQLEKMQLELTKKETFLQEQALALHKTRKKIAKELEKSILTELKSLYMENTEFEVRFS
SEKNGQLDANGLDQVEFYITTNPGEPLKPLVKVASGGELSRMLLALKTIFSSEQGVTSIIFDEVDTGVSGRVAQAIADKI
SQISCHSQVLCITHLPQVAAVADFQYYIQKEVIDGRTQTSVTELQPTQRETEIARMLAGSEITPLTVEHAKELLRLASK

Nucleotide


Download         Length: 1680 bp        

>NTDB_id=527233 I6I81_RS03780 WP_010719788.1 708722..710401(-) (recN) [Enterococcus hirae strain FDAARGOS_1124]
TTGTTACAAGAGATCAGTATTACTAATTTTGCGATTATTCCGGAATTGCATTTGTCTTTCCATAAAGGAATGACAGCTCT
AACTGGCGAGACCGGGGCAGGTAAATCGATTATCATTGATGCCCTTGGATTACTGGCTGGTGGTAGAGGCTCCAGTGATT
ATATTCGCCAAGGAGCCGATAAGTGTATCTTAGAAGGGTTGTTTGAATGGCCAAGTCAAGAAGGATTTACTGAATTGATG
GAAGAACTGGGCATCGAATCAGATGGTGATAACTTGATTGTTCGTCGTGATATGGCATTAACGGGTAAAAATGTCTGCCG
AGTCAATGGACATATTGTTACGCTGGCAAACCTTAGAAGGATCGGAAGTTATCTAGTTGATATTCAAGGACAAAATGAAC
ACCAGGAGCTATTACAACCAGAAGCCCATTTAAATTTATTGGATCGTTTTGGTGATCGTACTTTTCAACAACAAAAGAAA
AAATATCAAAAAGAGTATGCTATCTATCGTGAGCTCGAACGAAAAATGCGGAAAGTCCAACAAAATGAAAAATCATTTGT
TCAACGGATCGACATGCTTCATTTTCAACAAGAAGAAATCGCAGCAGCTGATTTACAAGTTGGCGAAGAGGAACAGTTAA
GCGAGGAAAGAGAAAAATTAAGCAATTATCAAAAGATCGTGGATAGTTTTGCTAGTGGTTATAGTGCATTGAGTGCGGGA
GAACCCAGTAGTGTGGATAACGTTGGTTTAGCTGTTTCTGAACTACAAAGCATTGCTCATCTAGATAATGAATATGAAGC
AATCGTTGAGAATGTTCAAAGTGCTTATTATTTACTTCAAGATGCCATTGGTGACATGAGTCGCCAAATCGATCTGTTGG
AATTGGATGAAAACCGATTAGAAGAAGTCAATCAACGGCTTGAATTGATTCGTCAGTTGAAACGCAAATATGGGGAGTCA
GTGGAAGCAATCCTTGATTATTACGAAGAAATCACTAAAGAACTGGATTCTTCTGATTTCTCAGAAGGTCAACTAGAAAA
AATGCAACTGGAATTAACTAAAAAAGAAACGTTCTTGCAAGAACAAGCATTAGCACTGCATAAAACAAGAAAAAAAATTG
CTAAAGAACTAGAAAAATCAATCTTAACGGAATTAAAAAGTCTATATATGGAAAACACTGAGTTTGAAGTCCGTTTTTCA
TCTGAAAAAAATGGACAATTAGATGCTAATGGATTGGACCAAGTGGAATTTTACATAACCACAAATCCTGGAGAACCATT
GAAGCCATTAGTAAAAGTTGCCTCGGGTGGGGAACTATCACGTATGTTGTTGGCGTTAAAAACTATTTTTTCTTCAGAAC
AAGGTGTGACTAGTATCATTTTTGATGAAGTGGATACAGGAGTAAGCGGCCGAGTTGCCCAAGCGATTGCAGATAAGATC
TCACAGATCTCATGTCACTCACAAGTTTTGTGTATCACCCATTTACCACAAGTCGCTGCAGTTGCCGATTTTCAATACTA
TATTCAAAAAGAAGTCATTGATGGGCGTACCCAAACATCGGTTACCGAACTACAACCCACACAACGAGAAACCGAAATTG
CCCGAATGTTAGCTGGAAGTGAAATTACCCCACTAACAGTCGAGCATGCCAAAGAATTATTACGCTTAGCAAGTAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V8X977

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

49.476

100

0.506