Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   K6974_RS02765 Genome accession   NZ_CP082204
Coordinates   507278..508054 (+) Length   258 a.a.
NCBI ID   WP_222336795.1    Uniprot ID   -
Organism   Streptococcus suis strain FJSM5     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 502278..513054
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6974_RS02755 (K6974_02735) - 505626..505788 (-) 163 Protein_492 transposase -
  K6974_RS02760 (K6974_02740) rlmD 505888..507240 (-) 1353 WP_222336794.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  K6974_RS02765 (K6974_02745) recX 507278..508054 (+) 777 WP_222336795.1 recombination regulator RecX Regulator
  K6974_RS02770 (K6974_02750) - 508130..508663 (+) 534 WP_024375910.1 DUF402 domain-containing protein -
  K6974_RS02775 (K6974_02755) - 508721..509038 (+) 318 WP_002942715.1 DUF960 domain-containing protein -
  K6974_RS02780 (K6974_02760) - 509138..509869 (+) 732 WP_222336796.1 GntR family transcriptional regulator -
  K6974_RS02785 (K6974_02765) - 510015..510725 (-) 711 WP_024377995.1 GntR family transcriptional regulator -
  K6974_RS02790 (K6974_02770) - 510947..512719 (+) 1773 WP_024377994.1 beta-galactosidase family protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30457.07 Da        Isoelectric Point: 9.5101

>NTDB_id=527231 K6974_RS02765 WP_222336795.1 507278..508054(+) (recX) [Streptococcus suis strain FJSM5]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKDITEQEFRELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYL
KKYEIEENNIVKIVTVLEEEKWLDDGNYVDSYVRQNALNGDKGPAMIRQKLMQKGIPKLLIDKRLAEEDFSELARKIGEK
LVGRYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDALIAKELDKQYRKYSRKYEGYELKQRLIQAL
ARKGYDFDRIQAVLRDYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=527231 K6974_RS02765 WP_222336795.1 507278..508054(+) (recX) [Streptococcus suis strain FJSM5]
ATGAGAATTACAAAAATTGAAAAGAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTATATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGAAAGGATATCACGGAGCAGGAGTTTCGTGAGCTTCGCGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCCTTCAAGCAACGTACCAAAAAAGAAGTTAGTGATTATCTA
AAAAAATATGAAATTGAAGAAAACAATATTGTCAAGATTGTGACGGTATTAGAAGAGGAAAAATGGCTGGACGATGGGAA
TTATGTTGATAGCTATGTCCGTCAGAATGCTCTAAATGGAGATAAGGGACCAGCTATGATTCGTCAGAAGTTGATGCAGA
AAGGAATTCCTAAACTGCTGATTGATAAAAGGCTGGCAGAGGAAGATTTTTCAGAGCTTGCTAGGAAGATTGGGGAGAAA
TTGGTGGGTAGATACCAAAGAAAATTACCCCTTCGAGCTTTGCAAGATAAAGTTGTACAGGGATTGATGGGTAAGGGGTT
TTCTTATGAGACGGCCAAACAAAGCCTGGGTCAGTTGGAACTTGTGGCTGATGAGGAAAATGAAGATGCCTTAATTGCCA
AGGAATTGGATAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGCTACGAATTGAAGCAAAGGTTGATACAGGCTTTG
GCTCGAAAGGGTTATGACTTTGATCGGATTCAGGCTGTCCTTCGTGATTATCTGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.581

100

0.368