Detailed information NTG0527062

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: K6976_RS07095
• Genome accession: NZ_CP082202
• Coordinates: 1442398..1443672 (-)
• Length: 424 a.a.
• NCBI ID: WP_202848696.1
• Uniprot ID: -
• Organism: Streptococcus suis strain SS389
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1437398..1448672

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6976_RS07070 (K6976_07070)	-	1438164..1438310 (+)	147	WP_002936026.1	SPJ_0845 family protein	-
K6976_RS07075 (K6976_07075)	-	1438312..1439217 (+)	906	WP_105140239.1	permease	-
K6976_RS07080 (K6976_07080)	-	1439214..1440029 (+)	816	WP_222759164.1	TIGR03943 family putative permease subunit	-
K6976_RS07085 (K6976_07085)	zwf	1440108..1441595 (+)	1488	WP_024407440.1	glucose-6-phosphate dehydrogenase	-
K6976_RS07090 (K6976_07090)	-	1441639..1442313 (+)	675	WP_222759165.1	DNA alkylation repair protein	-
K6976_RS07095 (K6976_07095)	pilA	1442398..1443672 (-)	1275	WP_202848696.1	signal recognition particle-docking protein FtsY	Machinery gene
K6976_RS07100 (K6976_07100)	-	1443674..1444486 (-)	813	WP_014637797.1	Cof-type HAD-IIB family hydrolase	-
K6976_RS07105 (K6976_07105)	-	1444476..1445285 (-)	810	WP_202848697.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47067.36 Da
• Isoelectric Point: 4.3555

>NTDB_id=527062 K6976_RS07095 WP_202848696.1 1442398..1443672(-) (pilA) [Streptococcus suis strain SS389]
MGLFDRLFGQEKQEEQVALVEEVETEQSASSEDTVTTVVESASQEKEEIQSEVVESELTAEQEAQKQRTLDMMAQYYAAK
EAAAARVKEAQEQGFDPAIQTKVKEEPVEEVVPVEQESEQDKYQRTLKKTRTGFGARLNEFFANFRSVDEEFFEELEEML
ILSDVGVQVASTLTEELRYEAKLQNAKKTDELRRVIIEKLVDIYEKDGQFSEQINFQDDLTVMLFVGVNGVGKTTSIGKL
AYKYKQAGKKVMLVAADTFRAGAVAQLVEWGRRVDVPVVTGPEKSDPASVVFDGVKRAVAEGVDILMIDTAGRLQNKENL
MAELEKIGRIIKRTLPDAPHETLLALDASTGQNALSQAKEFAKITPLTGLVLTKLDGTAKGGVVLAIRQELDIPVKLIGF
GEKIDDIGEFKSEEFMRGLLEGLV

Nucleotide

• Length: 1275 bp

>NTDB_id=527062 K6976_RS07095 WP_202848696.1 1442398..1443672(-) (pilA) [Streptococcus suis strain SS389]
ATGGGATTATTTGATCGATTATTTGGACAAGAAAAACAAGAGGAGCAAGTCGCTCTTGTTGAAGAAGTAGAAACGGAGCA
GTCGGCTTCTAGCGAAGATACTGTAACTACTGTAGTTGAGTCAGCTAGTCAAGAAAAGGAAGAGATCCAGTCTGAAGTAG
TAGAGTCTGAATTGACTGCTGAGCAAGAAGCTCAGAAACAACGGACCTTAGACATGATGGCTCAGTATTATGCAGCCAAA
GAAGCTGCTGCGGCTCGAGTGAAGGAAGCGCAGGAACAAGGCTTTGACCCTGCTATTCAAACCAAGGTCAAGGAAGAGCC
TGTTGAGGAAGTTGTTCCAGTAGAGCAAGAAAGTGAGCAGGACAAGTACCAGCGTACCTTGAAAAAGACGCGTACAGGTT
TTGGGGCAAGGCTCAATGAATTCTTTGCCAATTTCCGTTCGGTTGATGAAGAATTTTTCGAAGAGTTGGAAGAAATGCTA
ATTTTATCAGACGTAGGTGTGCAAGTTGCTTCTACTCTGACAGAGGAGCTCCGCTATGAAGCCAAGCTACAAAATGCCAA
GAAGACAGATGAACTCCGTCGGGTCATCATCGAAAAATTGGTGGATATTTACGAAAAAGACGGCCAGTTCAGCGAGCAGA
TCAATTTCCAAGATGATTTGACCGTCATGCTCTTTGTGGGTGTCAACGGTGTTGGGAAGACGACGTCTATCGGTAAGTTA
GCCTACAAGTATAAGCAGGCTGGCAAGAAGGTCATGCTGGTTGCGGCGGATACCTTCCGTGCGGGGGCGGTAGCCCAACT
GGTTGAGTGGGGTCGCCGTGTCGATGTGCCGGTGGTCACAGGACCTGAAAAGTCAGACCCAGCTAGTGTGGTCTTTGATG
GGGTAAAACGTGCTGTGGCAGAAGGTGTGGATATTCTCATGATTGACACAGCAGGTCGTTTGCAAAATAAAGAAAACCTC
ATGGCAGAGCTGGAAAAAATCGGTCGCATCATCAAACGGACCCTGCCTGATGCACCGCATGAAACCCTCTTAGCATTGGA
TGCTTCCACAGGTCAAAATGCCCTCAGTCAAGCCAAGGAATTTGCAAAAATTACCCCATTGACAGGCTTAGTCTTGACCA
AGCTAGACGGGACTGCAAAAGGTGGTGTTGTCCTTGCTATCCGTCAGGAACTGGATATTCCAGTCAAGCTGATTGGTTTC
GGTGAGAAAATTGATGACATCGGAGAATTCAAATCCGAAGAGTTCATGCGTGGGCTCTTGGAAGGATTGGTGTAG

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (221-420)

• SRP54-type protein, helical bundle domain (SRP54_N) (134-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	36.385	100	0.366