Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | I6J05_RS04080 | Genome accession | NZ_CP068073 |
| Coordinates | 804488..805462 (-) | Length | 324 a.a. |
| NCBI ID | WP_047130994.1 | Uniprot ID | A0AB37HCC2 |
| Organism | Staphylococcus condimenti strain FDAARGOS_1148 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 799488..810462
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J05_RS04045 (I6J05_04045) | gcvT | 799984..801078 (-) | 1095 | WP_047131000.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| I6J05_RS04050 (I6J05_04050) | - | 801270..801809 (-) | 540 | WP_152650907.1 | shikimate kinase | - |
| I6J05_RS04055 (I6J05_04055) | comGF | 801974..802450 (-) | 477 | WP_047130999.1 | competence type IV pilus minor pilin ComGF | - |
| I6J05_RS04060 (I6J05_04060) | - | 802392..802685 (-) | 294 | WP_047130998.1 | hypothetical protein | - |
| I6J05_RS04065 (I6J05_04065) | - | 802666..803079 (-) | 414 | WP_232011920.1 | prepilin-type cleavage/methylation domain-containing protein | - |
| I6J05_RS04070 (I6J05_04070) | comGC | 803099..803425 (-) | 327 | WP_047130996.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I6J05_RS04075 (I6J05_04075) | comGB | 803443..804516 (-) | 1074 | WP_047130995.1 | competence type IV pilus assembly protein ComGB | - |
| I6J05_RS04080 (I6J05_04080) | comGA | 804488..805462 (-) | 975 | WP_047130994.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I6J05_RS04085 (I6J05_04085) | - | 805534..806157 (-) | 624 | WP_047130993.1 | MBL fold metallo-hydrolase | - |
| I6J05_RS04090 (I6J05_04090) | - | 806157..806486 (-) | 330 | WP_047130992.1 | MTH1187 family thiamine-binding protein | - |
| I6J05_RS04095 (I6J05_04095) | - | 806486..807472 (-) | 987 | WP_047130991.1 | ROK family glucokinase | - |
| I6J05_RS04100 (I6J05_04100) | - | 807472..807672 (-) | 201 | WP_047130990.1 | YqgQ family protein | - |
| I6J05_RS04105 (I6J05_04105) | - | 807653..809113 (-) | 1461 | WP_047130989.1 | rhomboid family protein | - |
| I6J05_RS04110 (I6J05_04110) | - | 809130..809672 (-) | 543 | WP_047130988.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36915.69 Da Isoelectric Point: 6.9948
>NTDB_id=526934 I6J05_RS04080 WP_047130994.1 804488..805462(-) (comGA) [Staphylococcus condimenti strain FDAARGOS_1148]
MKRLLDTILTDAISKNVSDIHFIPIEKEVLIKFRIHDELINYDNIEILTYSKLLTFMKFQAGLDVSNYHQAQSGQTTFKH
QKLFNLRISTLPLSLGIESCVIRLSPQYFYQDGNCDGPKHFYHLMNKKQGLILFTGPTGSGKSTMMYEMVSFALKNLHLN
IITVEDPVEKRISGITQISVNEKAGIDYENSFKAILRCDPDIILIGEIRDAHIAKCVIQAALSGHLVLSTLHSNDCEGAL
LRLLEMGISPQEAQQSIALISNQRLVTNQHGSRELAYETMYQSDIQYFFKHDHTMPKHFMKLSKVLTQMSEEGVICEEVL
KRYT
MKRLLDTILTDAISKNVSDIHFIPIEKEVLIKFRIHDELINYDNIEILTYSKLLTFMKFQAGLDVSNYHQAQSGQTTFKH
QKLFNLRISTLPLSLGIESCVIRLSPQYFYQDGNCDGPKHFYHLMNKKQGLILFTGPTGSGKSTMMYEMVSFALKNLHLN
IITVEDPVEKRISGITQISVNEKAGIDYENSFKAILRCDPDIILIGEIRDAHIAKCVIQAALSGHLVLSTLHSNDCEGAL
LRLLEMGISPQEAQQSIALISNQRLVTNQHGSRELAYETMYQSDIQYFFKHDHTMPKHFMKLSKVLTQMSEEGVICEEVL
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=526934 I6J05_RS04080 WP_047130994.1 804488..805462(-) (comGA) [Staphylococcus condimenti strain FDAARGOS_1148]
ATGAAAAGACTTTTAGATACAATTCTGACAGATGCTATTTCTAAAAATGTTTCTGACATTCATTTTATTCCTATCGAAAA
AGAAGTTTTAATTAAGTTCAGAATTCATGATGAGCTGATAAATTATGACAACATAGAGATTCTGACATATTCAAAGTTAC
TTACATTTATGAAATTTCAAGCAGGTCTCGATGTGTCTAATTATCATCAAGCGCAAAGTGGACAGACTACTTTTAAGCAT
CAAAAATTGTTTAATTTACGTATTTCAACATTACCGCTATCTTTAGGAATTGAGAGTTGTGTCATACGACTTTCTCCACA
ATATTTCTATCAAGATGGTAATTGTGATGGACCAAAACATTTCTATCATCTAATGAATAAAAAACAAGGACTTATTTTAT
TTACAGGTCCAACTGGATCTGGAAAAAGCACTATGATGTATGAAATGGTTTCATTTGCTTTGAAAAATTTACACCTAAAT
ATTATTACTGTTGAGGATCCGGTTGAAAAAAGGATTTCAGGTATTACTCAAATTTCAGTAAACGAAAAAGCAGGTATTGA
TTATGAAAATTCATTCAAAGCTATATTGCGTTGTGATCCCGATATAATTCTCATCGGAGAAATAAGGGATGCTCATATTG
CAAAATGTGTAATTCAAGCAGCATTAAGCGGACATTTGGTACTATCCACTTTGCATTCAAATGATTGTGAAGGTGCTTTA
TTGAGGTTATTAGAAATGGGTATATCTCCTCAAGAAGCACAACAATCCATTGCTCTAATTTCAAATCAACGTCTCGTAAC
TAATCAGCATGGAAGCAGAGAATTGGCTTATGAAACGATGTATCAGTCTGATATTCAATATTTCTTCAAACATGACCACA
CAATGCCTAAGCATTTTATGAAGTTAAGCAAAGTGTTAACTCAAATGAGTGAAGAAGGTGTTATCTGTGAAGAAGTACTT
AAAAGATATACTTAA
ATGAAAAGACTTTTAGATACAATTCTGACAGATGCTATTTCTAAAAATGTTTCTGACATTCATTTTATTCCTATCGAAAA
AGAAGTTTTAATTAAGTTCAGAATTCATGATGAGCTGATAAATTATGACAACATAGAGATTCTGACATATTCAAAGTTAC
TTACATTTATGAAATTTCAAGCAGGTCTCGATGTGTCTAATTATCATCAAGCGCAAAGTGGACAGACTACTTTTAAGCAT
CAAAAATTGTTTAATTTACGTATTTCAACATTACCGCTATCTTTAGGAATTGAGAGTTGTGTCATACGACTTTCTCCACA
ATATTTCTATCAAGATGGTAATTGTGATGGACCAAAACATTTCTATCATCTAATGAATAAAAAACAAGGACTTATTTTAT
TTACAGGTCCAACTGGATCTGGAAAAAGCACTATGATGTATGAAATGGTTTCATTTGCTTTGAAAAATTTACACCTAAAT
ATTATTACTGTTGAGGATCCGGTTGAAAAAAGGATTTCAGGTATTACTCAAATTTCAGTAAACGAAAAAGCAGGTATTGA
TTATGAAAATTCATTCAAAGCTATATTGCGTTGTGATCCCGATATAATTCTCATCGGAGAAATAAGGGATGCTCATATTG
CAAAATGTGTAATTCAAGCAGCATTAAGCGGACATTTGGTACTATCCACTTTGCATTCAAATGATTGTGAAGGTGCTTTA
TTGAGGTTATTAGAAATGGGTATATCTCCTCAAGAAGCACAACAATCCATTGCTCTAATTTCAAATCAACGTCTCGTAAC
TAATCAGCATGGAAGCAGAGAATTGGCTTATGAAACGATGTATCAGTCTGATATTCAATATTTCTTCAAACATGACCACA
CAATGCCTAAGCATTTTATGAAGTTAAGCAAAGTGTTAACTCAAATGAGTGAAGAAGGTGTTATCTGTGAAGAAGTACTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
59.752 |
99.691 |
0.596 |
| comGA | Staphylococcus aureus N315 |
59.752 |
99.691 |
0.596 |