Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   I6J07_RS02535 Genome accession   NZ_CP068063
Coordinates   499613..500656 (+) Length   347 a.a.
NCBI ID   WP_002511392.1    Uniprot ID   A0A9X4QYU5
Organism   Staphylococcus equorum strain FDAARGOS_1150     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 494613..505656
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J07_RS02510 (I6J07_02515) - 495670..496389 (+) 720 WP_002507200.1 type 1 glutamine amidotransferase -
  I6J07_RS02515 (I6J07_02520) - 496488..497474 (-) 987 WP_103169955.1 FUSC family protein -
  I6J07_RS02520 (I6J07_02525) map 497655..498407 (+) 753 WP_002507202.1 type I methionyl aminopeptidase -
  I6J07_RS02525 (I6J07_02530) - 498512..498898 (+) 387 WP_002507203.1 hypothetical protein -
  I6J07_RS02530 (I6J07_02535) liaF 498915..499616 (+) 702 WP_002507204.1 cell wall-active antibiotics response protein LiaF -
  I6J07_RS02535 (I6J07_02540) vraS 499613..500656 (+) 1044 WP_002511392.1 sensor histidine kinase Regulator
  I6J07_RS02540 (I6J07_02545) vraR 500646..501275 (+) 630 WP_103169954.1 response regulator transcription factor Regulator
  I6J07_RS02545 (I6J07_02550) - 501471..502637 (-) 1167 WP_002511391.1 YihY/virulence factor BrkB family protein -
  I6J07_RS02550 (I6J07_02555) - 502868..503152 (-) 285 WP_002507208.1 hypothetical protein -
  I6J07_RS02555 (I6J07_02560) - 503159..503623 (-) 465 WP_002507209.1 low molecular weight protein-tyrosine-phosphatase -
  I6J07_RS02560 (I6J07_02565) - 503779..503961 (+) 183 WP_226956897.1 DUF1128 family protein -
  I6J07_RS02565 (I6J07_02570) - 503977..505215 (+) 1239 WP_056935763.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39973.32 Da        Isoelectric Point: 5.8180

>NTDB_id=526865 I6J07_RS02535 WP_002511392.1 499613..500656(+) (vraS) [Staphylococcus equorum strain FDAARGOS_1150]
MNHYIRAIGSMLILVYSTFFALFFIDKVFVNIVYFQGMFYTQIFGIPVLLFLNLLVIFLCIIVGSVLAYKINQQNHWLQD
QIERSIEGQTVGINDQNIELYNETIELYQTLVPLNQEVHKLRMKTQNLTNESYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETQLEAPLDQQIPILEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVVDLKKKVPMKVVHDI
EEFEVPKGIEDHLFRITQEALSNTLRHSKGTKVTVELFNMADYLLLRIQDNGKGFNVDDKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSHDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=526865 I6J07_RS02535 WP_002511392.1 499613..500656(+) (vraS) [Staphylococcus equorum strain FDAARGOS_1150]
ATGAATCACTACATAAGAGCAATAGGATCCATGTTGATATTAGTTTATAGCACATTTTTTGCTCTGTTTTTTATCGATAA
AGTATTTGTAAACATAGTATATTTTCAAGGTATGTTTTATACACAAATTTTTGGAATACCAGTTTTACTATTTTTAAACT
TATTAGTTATTTTTCTTTGTATTATTGTAGGATCGGTATTAGCATATAAAATAAATCAACAAAATCACTGGTTACAAGAC
CAAATAGAACGTTCTATTGAAGGTCAAACAGTAGGTATTAATGATCAAAACATTGAATTATATAATGAAACAATTGAATT
GTATCAAACGTTAGTTCCGTTAAATCAAGAAGTTCACAAATTACGTATGAAAACGCAAAACTTAACAAATGAATCATATA
ATATAAATGATGTGAAAGTTAAAAAGATTATAGAAGATGAACGACAAAGGCTTGCACGTGAATTACACGATTCAGTAAGT
CAGCAATTATTTGCAGCGAGTATGATGCTTTCAGCTATTAAAGAAACACAGTTAGAAGCACCTTTAGATCAACAAATTCC
GATATTAGAAAAAATGGTACAAGATTCTCAGTTAGAGATGAGAGCTTTACTATTACATTTAAGACCTATTGGATTAAAAG
ACAAATCATTAGGTGAAGGTATTAAAGATTTAGTCGTTGATTTAAAGAAAAAAGTACCTATGAAAGTTGTACATGATATT
GAAGAATTTGAAGTACCTAAAGGTATTGAAGATCATTTGTTCAGAATTACGCAAGAAGCTTTATCTAATACTTTGAGACA
TTCAAAAGGTACCAAAGTAACAGTAGAATTGTTTAATATGGCAGATTACTTATTATTACGCATTCAAGACAATGGTAAAG
GGTTCAATGTTGATGATAAGGTAGAACAAAGTTATGGTTTAAAAAACATGAGAGAACGTGCGCTTGAAATTGGTGCAACG
TTTCATATTGTTTCTTTACCAGATTCAGGTACAAGAATTGAAGTAAAGGCACCATTAAATAAGGAGGATTCACATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

88.184

100

0.882