Detailed information NTG0526813

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: I6J12_RS08805
• Genome accession: NZ_CP068060
• Coordinates: 1861253..1863682 (-)
• Length: 809 a.a.
• NCBI ID: WP_003036608.1
• Uniprot ID: -
• Organism: Streptococcus anginosus strain FDAARGOS_1155
• Function: degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 1856253..1868682

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J12_RS08780 (I6J12_08780)	-	1856534..1857352 (+)	819	WP_003036522.1	hypothetical protein	-
I6J12_RS08785 (I6J12_08785)	-	1857370..1858641 (+)	1272	WP_003036496.1	toxic anion resistance protein	-
I6J12_RS08790 (I6J12_08790)	hslO	1858862..1859734 (+)	873	WP_003036595.1	Hsp33 family molecular chaperone HslO	-
I6J12_RS08795 (I6J12_08795)	dusB	1859721..1860692 (+)	972	WP_003036548.1	tRNA dihydrouridine synthase DusB	-
I6J12_RS08800 (I6J12_08800)	-	1860766..1861206 (-)	441	WP_003036494.1	GNAT family N-acetyltransferase	-
I6J12_RS08805 (I6J12_08805)	clpC	1861253..1863682 (-)	2430	WP_003036608.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
I6J12_RS08810 (I6J12_08810)	-	1863686..1864147 (-)	462	WP_003036579.1	CtsR family transcriptional regulator	-
I6J12_RS08815 (I6J12_08815)	-	1864406..1864756 (+)	351	WP_003036598.1	hypothetical protein	-
I6J12_RS08820 (I6J12_08820)	tsf	1864843..1865886 (-)	1044	WP_003026508.1	translation elongation factor Ts	-
I6J12_RS08825 (I6J12_08825)	rpsB	1865969..1866751 (-)	783	WP_003036542.1	30S ribosomal protein S2	-
I6J12_RS08830 (I6J12_08830)	comR/comR2	1866984..1867457 (-)	474	WP_020999414.1	sigma-70 family RNA polymerase sigma factor	Regulator
I6J12_RS08835 (I6J12_08835)	rplQ	1867884..1868270 (-)	387	WP_003026513.1	50S ribosomal protein L17	-

Sequence

Protein

• Length: 809 a.a.
• Molecular weight: 89896.32 Da
• Isoelectric Point: 6.6032

>NTDB_id=526813 I6J12_RS08805 WP_003036608.1 1861253..1863682(-) (clpC) [Streptococcus anginosus strain FDAARGOS_1155]
MKYSKALTESIESAQLLASHFETDYLESWQLLIAMANNPYSVAGSVLNDYPLEIDDFEKAAFHITGKIYQQEGSFTIWPF
SHRMKVLFLTAERIAEAVHAKNLGTEHVLLAMLFDRGSLAARLLEFTGFSYEDKEGVLRMTDLRKNLEHKASWGKEDIKA
IRHLNKNIAAAKQTMANMMGMPPSTSGGLEDYTRDLTEMARAGLLEPVVGRDKEISRMLQILSRKTKNNPVLVGDAGVGK
TALALGLAQRVAAGQVPNELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEADGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKYIEKDAALSRRFAKITIEEPTVADSIAILQGLKKSYEEHHKVVITDSAIET
AVKYAHRYLTSKHLPDSAIDLLDEAAATVQNKGPQNHVKAELSAADEALMAGDWKKVGALLEKESQPIVYKLKVKDEDIL
ATLSGLSGIPVQKLTQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDETALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSE
DMQEVVKIMVQPLISSLAEKGIKLKFQPSALKLLAQEGYDPEMGARPLRRILQTRVEDHLSELLLAGELKTGQSLKVGVK
AGKLKFEVL

Nucleotide

• Length: 2430 bp

>NTDB_id=526813 I6J12_RS08805 WP_003036608.1 1861253..1863682(-) (clpC) [Streptococcus anginosus strain FDAARGOS_1155]
ATGAAATATTCAAAAGCTTTGACAGAAAGTATTGAGTCGGCACAACTGTTAGCGAGTCATTTTGAAACGGATTATTTGGA
GTCTTGGCAGCTGTTGATTGCTATGGCAAATAATCCTTATAGTGTTGCTGGTTCAGTTTTAAATGATTACCCACTTGAAA
TTGATGATTTTGAGAAAGCAGCCTTTCATATCACAGGAAAGATTTATCAACAAGAGGGAAGCTTTACCATTTGGCCATTT
TCTCATCGTATGAAAGTGTTGTTTTTAACAGCTGAGCGAATTGCAGAGGCTGTGCATGCTAAGAATCTTGGGACAGAGCA
TGTGTTGTTAGCTATGCTGTTTGACCGAGGAAGTTTGGCGGCACGTCTCCTTGAATTTACAGGCTTTAGCTATGAGGATA
AAGAAGGCGTTTTACGTATGACCGATCTTCGGAAAAACTTAGAGCATAAGGCTAGCTGGGGTAAAGAAGATATAAAAGCT
ATTCGCCACTTAAATAAAAATATTGCTGCAGCGAAACAAACGATGGCCAATATGATGGGGATGCCTCCTTCTACTAGTGG
CGGACTAGAAGATTATACCCGTGATTTAACCGAAATGGCTCGTGCTGGTCTTTTAGAACCGGTCGTTGGGCGTGATAAAG
AGATTTCTCGCATGCTTCAGATTTTAAGTCGCAAGACGAAAAATAATCCAGTGTTGGTAGGAGATGCAGGAGTTGGGAAG
ACAGCATTAGCCCTTGGTTTGGCGCAACGTGTGGCAGCTGGTCAAGTTCCAAATGAGCTTGCAAAGATGAGAGTTTTAGA
GCTAGATTTAATGAATGTGGTGGCTGGAACTCGTTTTCGTGGTGATTTTGAGGAACGGATGAACAATATTATCAATGATA
TTGAAGCAGATGGACATGTCATTCTTTTCATTGATGAGCTTCATACTATTATGGGGTCGGGTAGCGGGATTGACTCGACA
TTAGATGCAGCGAACATTCTCAAGCCAGCTTTAGCTAGAGGGACGCTCAGAACGGTCGGCGCAACGACACAAGAAGAGTA
CCAGAAATATATTGAAAAGGACGCAGCTCTTTCACGGAGATTTGCCAAGATTACTATTGAAGAGCCGACGGTAGCTGATA
GTATTGCGATTTTACAGGGGCTCAAGAAAAGTTATGAAGAACACCACAAAGTGGTGATTACAGATTCAGCGATTGAGACA
GCTGTTAAGTATGCTCATCGTTATCTAACAAGCAAACACCTACCTGACTCGGCGATTGATTTGCTAGATGAAGCTGCTGC
AACGGTACAAAATAAAGGTCCACAAAATCATGTGAAAGCAGAATTGAGTGCAGCAGACGAGGCTTTAATGGCAGGCGATT
GGAAAAAGGTTGGCGCTTTGTTGGAGAAAGAAAGTCAGCCAATTGTCTACAAACTAAAGGTTAAAGACGAGGATATTTTG
GCAACACTCAGCGGTTTATCGGGCATTCCTGTGCAAAAGTTGACGCAAACAGATGCGAAGAAATACCTTCATTTAGAAAA
GGAACTTCACAAACGGGTCATTGGGCAAAATGAAGCAATTTCTGCTATCAGTCGAGCGATTCGGCGCAATCAATCCGGCA
TCCGCACCAGCAAACGTCCCATCGGCTCCTTTATGTTCTTAGGGCCAACCGGGGTCGGAAAAACTGAGCTAGCTAAGGCT
TTGGCAGAAGTTCTCTTTGATGACGAAACGGCACTGATTCGTTTTGATATGAGTGAATACATGGAAAAATTTGCTGCCAG
TCGCCTTAATGGAGCGCCTCCAGGTTATGTTGGTTATGAAGAAGGGGGCGAATTGACTGAAAAAGTTCGCAATCGTCCGT
ACTCTGTGCTCCTCTTTGATGAGGTAGAAAAAGCTCATCCTGATATTTTCAATGTGCTTCTCCAAGTCTTAGATGACGGG
GTGCTGACAGACAGCAAGGGGCGTAAGGTGGATTTTTCCAATACCATTATCATTATGACCAGCAATCTTGGTGCGACAAG
TTTACGGGACGACAAGACGGTTGGGTTCGGAGCAAGAGATGTTCGTTTTGATCATGAAAATATGGAAAAACGAATGATGG
AAGAGCTAAAGAAAGCTTATCGTCCAGAATTTATTAACCGAATTGATGAAAAGGTTGTTTTTCACAGTTTGACTAGCGAA
GACATGCAGGAAGTAGTGAAAATTATGGTGCAACCGCTCATTTCTAGTCTTGCAGAAAAAGGAATTAAACTCAAATTCCA
GCCGAGTGCTTTGAAGCTTCTAGCTCAAGAGGGCTATGATCCTGAAATGGGAGCTCGTCCATTGCGTCGAATTCTACAAA
CTCGGGTGGAAGACCATTTATCAGAATTACTTTTAGCAGGTGAGCTAAAAACGGGACAAAGCTTAAAAGTCGGTGTCAAG
GCTGGAAAATTGAAGTTTGAAGTGCTCTGA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (717-797)

• AAA domain (Cdc48 subfamily) (AAA_2) (539-710)

• ATPase family associated with various cellular activities (AAA) (AAA) (231-350)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (14-60)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (91-130)

• AAA lid domain (AAA_lid_9) (371-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus pneumoniae TIGR4	77.559	100	0.778
clpC	Streptococcus pneumoniae Rx1	77.559	100	0.778
clpC	Streptococcus pneumoniae D39	77.559	100	0.778
clpC	Streptococcus mutans UA159	66.871	100	0.674
clpC	Streptococcus thermophilus LMG 18311	66.095	100	0.667
clpC	Streptococcus thermophilus LMD-9	65.973	100	0.666
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	50	100	0.513
clpC	Bacillus subtilis subsp. subtilis str. 168	45.33	99.258	0.45
clpE	Streptococcus mutans UA159	47.106	76.885	0.362